Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc183027g00001 ATGAACATGGATATGCTTGTTACCCTAGTCCGGGTTCCCCTGTTAGTGATGCCGTGGATAGGCTGTGAATTTTTGAGGTTAAGGACTCGTAACAACCATATCTGTAGTCGAACCTTTGGAATGCTGGCATTGGATCCATTAATCGGTGCTATAGCTGCTGGAAATGTTGTTGTAATAAAGCCTTCAGAGTTAGCTCCAGCATGCTCTTCATTTCTTGCAAACACCATTCCTCGCTACTTGGATTCTAATGCTGTGAGGGTCATAGAGGGAGGTGCACCCGTTTCTGAACAACTACTGCTACAGAAATGGGACAAAATTTTCTTCACTGGAAGTCCACGTGTAGCAAGGATTGTGATGACAGCCGCAGCAAAGAACTTGACTCCGGTTACATTAGAGCTGGGTGGAAAATGCCCAGCCATTCTTGATTCACTGCATAATCCTTCAGATTTTGAGTTGGCGGTGAAAAGAATCGTAGGAGGGAAGTGGGGACCTTGCAGCGGACAGGCATGCATTGGGATAGACTATGTGCTTGTTGAGGAGAAACTCTCTTCTCATTTGATAGAACTATTAAAGAAGTTTGTTAAAAGATTTTATGGTGAGAATCCATTAGAGTCAAAAGTGATTTCCAGGATAGTAAGCAAGCAGAACTTCACGAGACTCTGCAATCTTCTTAAAGATCCTCTTGTCGCAGCTTCCATCGTTCACGGTGGTTCTGTAGAAGAAAAACACCTGTTGATTGAGCCCACAATCTTGCTTGATCCTCCGTTATATGCTGACATAATGACTGAAGAAATTTTTGGACCATTTCTTCCCATAATCACGGTGAATAAAATTGGGGAAAGTGTTGAGTTTATCAATTCAAGGCCAAAACCTCTTACCATTTATGCCTTCACCAAAGATGAGACTTTCAAGAGAAGAATTCTTTCAGAAACGTCCTCAGGGAGTGTCACATTCAATGACACAATGGTTCAATTTTTATGCGATACGCTACCATTTGGAGGTGTTGGGCAAAGTGGTTTTGGAAGTTACCATGGGAAGTATTCATTCGACACATTTAGTCATGAAAAAGCAGTAATGCATAGAAGCCTATGCCTTGAAATTGAGCCAAGATACCCTCCTTGGAGCAAGTTCAAGCTTGAATTTCTCAGATTGGCATACAAACTAAACTATTTTGGACTATTACTGCACATCCTGGGTTTGAAAAGATACAAGTAG 1215 0.4181 MNMDMLVTLVRVPLLVMPWIGCEFLRLRTRNNHICSRTFGMLALDPLIGAIAAGNVVVIKPSELAPACSSFLANTIPRYLDSNAVRVIEGGAPVSEQLLLQKWDKIFFTGSPRVARIVMTAAAKNLTPVTLELGGKCPAILDSLHNPSDFELAVKRIVGGKWGPCSGQACIGIDYVLVEEKLSSHLIELLKKFVKRFYGENPLESKVISRIVSKQNFTRLCNLLKDPLVAASIVHGGSVEEKHLLIEPTILLDPPLYADIMTEEIFGPFLPIITVNKIGESVEFINSRPKPLTIYAFTKDETFKRRILSETSSGSVTFNDTMVQFLCDTLPFGGVGQSGFGSYHGKYSFDTFSHEKAVMHRSLCLEIEPRYPPWSKFKLEFLRLAYKLNYFGLLLHILGLKRYK 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc183027g00001 404 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 135 338 IPR016163 GO:0016620
Stsc183027g00001 404 FunFam Aldehyde dehydrogenase 135 338 - -
Stsc183027g00001 404 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 41 356 IPR016162 GO:0016491
Stsc183027g00001 404 Pfam Aldehyde dehydrogenase family 42 358 IPR015590 GO:0016491
Stsc183027g00001 404 SUPERFAMILY ALDH-like 41 373 IPR016161 GO:0016491
Stsc183027g00001 404 PIRSF ALDH 40 398 IPR012394 GO:0006081
Stsc183027g00001 404 PANTHER ALDEHYDE DEHYDROGENASE 41 395 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc183027g00001 Stsc-Chr183027 3026 10161 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc183027g00001 42 402 Aldehyde Dehydrogenase Gene Family AT4G36250 63.712 3.46e-172 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc183027g00001 K00128 - gmx:100809812 636.721