Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc183021g00002 ATGGTATCATGTTTTTGTTTCGCCTTTAGGCCGGAGTTCGGAGAGGTTGAAAAAATTGTTCAGAAAATAGTGAAAACATTGAATCACAAATTCTCTGGGTTTGCTGACGACTTGATTGGGGTGCAACCTCGTGTGGAAGGATTGGAAAAGCTTCTCAAGTTAACATCACAGGATGATGGCTTTCGAGTTTTAGGAATATGGGGGATGGGCGGAGTAGGAAAGACAACTCATGCTACTGCCTTATATGATAGAATCTCTTATCAATTTGATGCTTCTTGTTTTGTTGAGAACGTTAGCAAACTTTACAAGGATGGTGGTGCTATGGCCATACAAAAACAGATTCTTCGTCAATCTATTGATGAAAAAAATTTAGATACCTACAGTCCTTCTGAAGTATCTGGGATTATAGCAAATAGGGTACACAATATAAAAGTCCTTATTGTCCTGGACAATGTTGATCAGCTAAAGCAATTGGAAGAGTTGGCTATAAATCCTAAACTGCTTTGTGAAAGGAGTAGAATAATAATAACAACCAGGGATGAACATATTTTAAAAGCGTATGGAGCCGATCAAGTTCATAACGTTCCTCTGTTGAGTGATGAAGATGCTAAAGAACTTCTCAGTAGAAAAGCCTTCAAAAGAGATTGTTCAAGCAACAATTATGAGGAGCTGATCCCTGAAGTGCTGAAATACGCTCAAAGACATCCTCTAACAGTTAGAGTGGTGGGTTCTTTCTTGTGTTCCTGCAGTGCTACCCAATGGAGAGATGCCCTAGATAGATTAAGGAATAACCTAGAAGACGAAATTACAAACGTGCTTCGGATAAGTTATGAGGGACTACAATTTGAGGAGAAAGAAATATTTCTACACATTGCTTGTTTCTTTAGAGGAGAAAGAGGGGATTATGTAAAGCGAATACTAGATGCTTGTGGATTACATCCTCACATTGGAATTCCTGTTATCGAAGAGAAATCACTCATAACCATTAGAAACCAGGAAATCCATATGCATGAAATGCTGCAAGAGCTGGGAAAGATAATTGTTCGGGAGAAATATCCTCAAGATCCTGGATCATGGAGTAGGATATGGAGTTACAAGGATTTCCATCATGTCTTGATGTCTGAAATGGGAACAAAGAAAATTAAAGCAATAGTTCTTGATGTGAAAGAGGATATCAACATATGCAACCAGTTGAAGGTTGAAGAGTTGTCCAAAATGGTGGGTCTTAAGCTGCTCATTATACATGAAAAAAACCATTCAGGATGCCTTAACTCTCTTTCTGATTGTCTAGAGTATCTTTCGTGGCATGGTTACCCTTTCCCTTCTTTGCCACCAAAGTTTGAGCCTTATGCCACTCTGGTTGAATTGAATCTGCCTGGTAGTAGAATAAAAATCCTATGGGAAGGCCGAAAGAGTTTATGCTGCCTCAGAAGAGTGGATTTGAGCAACTCGAAGGAGCTTCTGGAGACTCCAGATTTTGAATGGTGCCCAAATCTTGAGTGA 1503 0.3932 MVSCFCFAFRPEFGEVEKIVQKIVKTLNHKFSGFADDLIGVQPRVEGLEKLLKLTSQDDGFRVLGIWGMGGVGKTTHATALYDRISYQFDASCFVENVSKLYKDGGAMAIQKQILRQSIDEKNLDTYSPSEVSGIIANRVHNIKVLIVLDNVDQLKQLEELAINPKLLCERSRIIITTRDEHILKAYGADQVHNVPLLSDEDAKELLSRKAFKRDCSSNNYEELIPEVLKYAQRHPLTVRVVGSFLCSCSATQWRDALDRLRNNLEDEITNVLRISYEGLQFEEKEIFLHIACFFRGERGDYVKRILDACGLHPHIGIPVIEEKSLITIRNQEIHMHEMLQELGKIIVREKYPQDPGSWSRIWSYKDFHHVLMSEMGTKKIKAIVLDVKEDINICNQLKVEELSKMVGLKLLIIHEKNHSGCLNSLSDCLEYLSWHGYPFPSLPPKFEPYATLVELNLPGSRIKILWEGRKSLCCLRRVDLSNSKELLETPDFEWCPNLE 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc183021g00002 500 Gene3D - 16 192 IPR027417 -
Stsc183021g00002 500 Gene3D - 197 281 IPR042197 -
Stsc183021g00002 500 Gene3D Ribonuclease Inhibitor 320 500 IPR032675 -
Stsc183021g00002 500 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 500 IPR044974 GO:0006952
Stsc183021g00002 500 Coils Coil 251 271 - -
Stsc183021g00002 500 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 291 IPR027417 -
Stsc183021g00002 500 Pfam NB-ARC domain 51 267 IPR002182 GO:0043531
Stsc183021g00002 500 SUPERFAMILY L domain-like 393 500 - -
Stsc183021g00002 500 PRINTS Disease resistance protein signature 139 153 - -
Stsc183021g00002 500 PRINTS Disease resistance protein signature 63 78 - -
Stsc183021g00002 500 PRINTS Disease resistance protein signature 232 246 - -
Stsc183021g00002 500 PRINTS Disease resistance protein signature 471 487 - -
Stsc183021g00002 500 SUPERFAMILY "Winged helix" DNA-binding domain 267 372 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc183021g00002 Stsc-Chr183021 4664 7041 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc183021g00002 39 500 WRKY Transcription Factor Family AT5G45050 31.546 3.70e-66 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc183021g00002 - - adu:107462392 773.081