Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stsc182g00010 | ATGAAGGAAAGCAATTCATCAGCACCCGCAATGATGAACAGCAAATGGGTTTTAAAGCGTAAGCGCAGAAAGCTCCCTTTAGGACAGGATCAATCCTCTGGTAAAGAGGAATCCAATGGTAAAGATCAATCCAATTGTAAAGAGCAACCCAACGGGAAAGAGCAATCAAATGGCAGAGATGACAATTCAGCAACATCTGACTCTTCTAGGAGTGCTTCGGCTAAACGCATGTTAAAGACTGAAGTAGCTACTGATCAATCTTCGTCCAAGAAGAAAGGACATGATGGGTATTACTATGAATGTGTGGTCTGTGATCTTGGTGGCAACTTATTGTGCTGTGATAGCTGTCCTCGCACTTATCATATACAGTGTCTTAGTCCACCTCTTAAGCGCATCCCCACGGGGAAGTGGCAATGTCCAAGCTGCTTTGAAGAAAATGATCACCCAAAGCCTATGGATCATTTGGAGTCAATTTCGAAACGAGCAAGGACCAAGATAGCTAAGGACAAGCAAGTTGGAGCCAACTCACTTTGCCTTGAGAAAGTTTCTCGAATTTTTGGAAATAAACACATTTCCAAGAAAAGGTCATCGAGCAAGGCAAAACCTATTTCCAGTTTGGGGGTGAAATTCTTTGATAAGAAACCTTTTTCTTCCCTAGTGGATGCAAACAAGCCAAAAGACCCATCCGTCGGGAGTTCCATAGAAGGAACTTCATCATGTGCTGATGTGGATGACAAAAAATCAAGTGCTTCGCCAACAGTTATCCTTGTGGATGAGAGGGCATCTTCACCTGCTAGGGAAATTGTTTCTCCTTCTAAAGATACTAATTTAGAGTCAAATGATGAACAGCTGGAGGGAAAGCCTGATTTATCTTGTAATCAAATTCCTTTAAAAAAGACGGTTGTTCTTGCAATTGGTGTTGGTGGAGAGGAGGGAAGAAAAAGGAAGAATAAAGATGTTAATAATAATACTAGCCAAAAGAAGCGTAGGACGGAAAAGGGGAAAACATTTGTTAATACTTCTGTAAAGTGTAAGTCTGGCAATAATAAAACACCTAAGAAGAAGAAATCTGTAACTTATAGCATCTCTGCATCCGGATCAAAAGAGAAATTTGGAAACAAAAATTCTGAAGTCCAGAAGAAAGATCAGATGATCTCTCGGCTAATGAAAGACACATCAAATGAGCCTGATATAGCAGGAAGGCGTGCGGATGGAACTTTGATGGGTGAAGATGGTGCTGTTGTTGAATCTTTGCAGGTTGATCGGGTTCTAGGGTGTCGAATTCAAGGTGAGAATGCAAACACATTACAACCTGCATCTTTGACCGTTTCAAATGACTCACCTGGTGATCAGGCAATCTCAGAAAACCAGAATCGACTATTGGAGGATAATTCCACTGATGATAATGATTTGGATGCTGATACAGCTGAAAATGTTGTTGATGATCCACAAAATGTTATCAAGAGTTCTGATAAAGAAGAACCATTGACAAACTCCAATAGAGTGGAAACAATTAATGTATACAGAAGATCAACGACAAAGGAAAGTAAGAAGGGAAGTTCCGCAGATTCATTGAGTAAACCTACTGATGATTTAGGTTCCTGTCCCAGGGATAGTAATGATCAGGATGATTCTACCGTTTCTGCTGAAAATTTGGAAAAAGCAAGTGACAAGATGGAAATGGAGGAGAGTATCACTGTTGCACTAGAAAGCAAGGATAACAGTGGGCTTCCAGAAAACTCTGAAATGCCGGCCCCTCTTGAGACAAAATTGAAAGAAGTGGATATGGAGAAGGGAGTGAGTACCGATGTAATTGAGAAAAAAGTTCTGGATGCTAATGTGGCTGAATCTTCTTCTGTAAATGGAAAGAAAGTCTCCTATGAATTTTTAGTTAAGTGGGTAGGAAAGTCTAATATTCATAATAGTTGGATTTCTGAATCCCGGTTGAAAATCCTTGCCAAGAGAAAACTAGAAAATTACAAGGCGAAGTATGGGGTATCAATAATAAATATTTGTGAGGAGCGTTGGAGACAGCCTCAGCGAGTTCTTGCACTCCGTGCATCAAAAGATGGAGCATCTGAAGCATTTGTAAAGTGGACTGGACTACCTTATGACGAATGCACTTGGGAAAGTTTAGATGAACCTGTGCTTCAAAAGTCTTCTCATCTGGTTACACTTTTTCATAAGCATGAAGCACTAACTCTCGAAAGGGATGCATCAAAGGAAAATTCAGCAAGGAAAAGCAATGAGCATCGGCATGATATCTTTAATCTAACGGAGCAACCTAAGGAGCTGAAAGGCGGTGCGTTGTTCCCCCATCAACTTGAGGCTCTCAACTGGTTACGTAAATGCTGGTATAAGTCCAAAAATGTGATACTTGCAGATGAGATGGGACTTGGGAAAACAGTCTCCGCTTGTGCTTTTATTTCATCATTGTATTTTGAATTCAAAGCTAAACTTCCTTGCTTGGTCTTGGTACCCCTTTCCACAATGCCTAATTGGCTTGCTGAATTTGCACTTTGGGCTCCGGATGTGAATGTTGTGGAATATCATGGCTGTGCAAAAGCAAGAGCCATGATTCGCCAGTATGAATGGCATGCTAATGATCCAAGTGGGGTGAATAAGAAAACAGAAGCTTTTAAATTCAATGTGCTTTTAACTACATACGAAATGATTCTTGCTGATTCCTCTCATCTGCGTGGAGTTCCTTGGGAAGTTCTGGTTGTTGATGAGGGACATCGACTGAAAAATTCTGGAAGTAAGCTTTTCAGTTTGCTGAATACCTTCTCTTTTCAACATCGTGTACTGTTGACAGGTACCCCTCTCCAGAACAATATTGGTGAGATGTACAACTTGCTCAATTTCTTGCAACCATCATCATTTCCTTCTCTGTCTTCATTTGAGGAGAAGTTTAATGATCTTACGACTGCGGAAAAGGTTGACGAGTTGAAAAAACTTGTGGCTCCTCACATGCTTCGTAGACTTAAAAAGGATGCAATGCAGAATATTCCTCCCAAGACAGAAAGAATGGTTCCTGTTGAGTTGTCATCCATCCAAGCTGAATATTACCGTGCAATGCTTACAAAGAATTATCAAATACTGCGGAATATTGGGAAAGGGGTTGCTCAACAATCTATGCTGAACATTGTTATGCAACTGAGGAAGGTCTGCAATCATCCATATCTCATACCAGGAACTGAGCCTGATTCTGGGTCTGTTGAATTTCTTCATGAAATGAGAATAAAGGCTTCAGCTAAGCTTACTCTCCTGCACTCCATGCTAAAGATTTTACATAAGGAAGGACACAGAGTTCTTATTTTCTCTCAAATGACAAAGCTGCTCGACATCCTTGAGGACTATTTGACCATAGAATTTGGGCCTAAAACATATGAGAGGGTGGATGGCTCCGTTGCTGTCGCTGATCGTCAGACAGCAATTGCACGCTTTAACCAAGACAAGAGTCGATTTGTTTTCTTGTTATCTACTCGTTCTTGTGGACTTGGGATAAATTTGGCAACTGCTGACACTGTCATCATCTATGACTCTGATTTCAACCCTCATGCAGATATCCAAGCCATGAATCGAGCACACAGAATTGGTCAATCAAAGAGACTTTTGGTATACCGGCTTGTGGTTCGTGCTAGTGTTGAAGAGCGTATCTTACAGCTTGCCAAGAAGAAACTGATGCTTGATCAGCTTTTTGTAAATAAGTCTGGATCTCAAAAAGAAATCGAAGATATTTTGAAATGGGGAACTGAAGAACTCTTCAATGATTCTCCTGGCCTAAATACAACTGAAACTAACAATAACCTTCAAGATGGTTCAACAGATATTGCTGAAGGGGATTCCGAGAACGATATGCTTGGCTCAGTGAAGGCACTTGAGTGGAATGATGAGCCAGCTGAGGAGCATGGAGTGGATGAATCTCCTCCTGACGGAACTGATGATTTATGTACTCAAAATTCTGAAAAGAAAGATGATGCTGCCATGATTGCAAATGAAGAAAATGAATGGGACAGACTACTGCGTGTGAGGTGGGAGAAATATCAAAGTGAGGAGGAAGCAGCCCTTGGTCGAGGGAAGCGCCAGAGAAAAGCTGTTTCTTATAGGGAAGCATATGCTCCACACCCAACTGAAACAATGAGTGAGAGTGGCGGTGAGGAGGAAAAAGAGCCAGAACCAGAACCAGAGCGTGAGTATACACCAGCAGGACGGGCGCTGAAGACGAAATATGCTAAACTCCGTGCTCGGCAGAAGGAGCGAATTGCTCGGAAGAAAGAAGCAGCATTACGTCCTCCTGAGGAAATTCCAGGAGTTGAGTCACTCCCCCAGCTCCCAGCTAAGGGTGGGGACCTAGGAGCTGGAGCGATGCATCCTGTTAAAGAGGGGCGTTCCATCACCTTAGTGGATAGCAAATCTAATCAACTTGCTGAAGCACAAGTTCAGAACAGCAACAACACAGATTCCGTTTCAAGGATCGAGAGGCTTTCGAAACATAAAATGAGCAACCATTTTGATGGTCATGTCAATAATCCAAGCCGTACCCTACCTGATATTTTTGTTCCAAATCACCATATTAAGGGGGGACTAAGTACCTCAAACTCTATGCCCTCCAACAATTTGTTACCTGTTCTGGGACTCTGTGCTCCTAATGCCAACCAGATGGAATCTTCAGAGAGTAATGTTTCCAAGTTAAATTGGAGACAAAGTAGACAAGGACTGAGACAAGAATTTCCATTCAATCTTGCCTCTTGCTCCGGGACATCCATGGATCCAGAGGTCAGAAATCAGGAAATGCCACCAAATGCCAAACTACCAGATGCTGCAACCGAAAATGTCAAACAAAATTTCAAAAATAGCATCCCTGATAGCAATCTCCCATTTGTTCCGTTCCCACCTTCTTTAAAAGGAAAGGAGTCCAATGCATTTGAAAAATCAGGTGCTAGATTCTCTACTTTCCAGGAGAAAATGGCCCTGCCAAATCTGCCATTTGATGAAAGGTTACTGGCACGATTTCCGCTTACAACAAAGAGCATGGCAAATTCACATCTGGACCTCTTACCTAATTTGTCATTAGGAGGCAGGTTTGAACCTCTGAATGGATCTGGGCAAGAGCTTCCATCAATGCCAGCATTACCCACTTTCAAAAATCCCCCTGAAGACTTGTTCAGATATAATCAGCAAGACAGGGACGCCCCTCCTAGCCTGGGTTTGGGACAAAGACCAACCACATTCCCGTCTTTCCCAGAAAACCATAGGAAGGTGCTTGAAAACATAATGATGAGGACCGGCTCTGGATCAAGCAGCTCGTTAAAAAAGAAGTCAAAATCAGATGGATGGTCTGAAGATGAGCTCGATTCCCTCTGGATTGGTGTCCGGAGGCATGGAAGGGGTAATTGGGATGTTATGCTCAGGGATCCCAAGTTAAAGTTTTCAAGGTACAAGACAGCTGAAGATTTATCAGGGAGGTGGGAAGAGGAACAGGTAAAGGTCTTTCAGGGACCAGCTTTTCCTGTGCCAAGGTCATCCAAGATGACAAAGTCTACCAAATCTGCAAATTTTCCAATCTCTGATGGAATGATGGAAAGAGCTTTGCAGGGGAGCAAATTCATCTTGCCACCAAAATTTCAAAACCATTTGACTGACATGAAATTAGGGATAGGTGAGTCTGTGTCTGGTCTGCCGCATTTTAGGACATTGGATCGACCTGGTTTGCCAAATGATCAGTTTGTGCCACTGCCATCTTGGAGTTCTGATAAGCACATGGCAAAACTTCCCGAAGATGGTGCTGCTGAATCATCTGATAGGCCTGGTACTTCTAATGCTCCTCCTGAGCACCGGTTTATGCTAAGTTCTTTTGGAGCCAGTTTGGGTTCTTTAGGTTTGAATTGCTCGGGTGGCATTGATATACGGCAGAAGGAAAATGAACAGCGAAACAGGAAGCGAGGAAAGTTACCAGAGCTCCTGGATGGGTCATCCAACGATTTGCATGATAATCGGGTAAATGTTGGAAATGGTGAATCAACAGGCTCAGGATTGGCATCTAACCCCATTAGACCTGATCTTTCACACTCGAAAGGAGATGATGTAGCTGGGAGTAGTACTTCAAAAGACAAGCTTCCACATTGGTTGCGAGAAGCAGTGAGTCCCCCTGCCAAACATCCTGATCCTGAACTGCCACCTACAGTATCAGCGATTGCTCAATCAGTTCGCATGTTATATGGAGAAGATAAGTCAACAATTCCTCCATTTGTGATTCCTGGACCACCTCCTTCCTTGCCTAAGGATCCCAGGTGTATTCTCAAGAAGAAGAAGAAGAGAAGGTCGCCTAAGTTTGATCAGGGTCTTGCAGATTTTGCAGGATCAAGCAGGGACTTCCCCAGCAACCGCGATGCTGATAATGGTGCTTCAAGCTCAACTCCATCATCGGGCCCACCATTTCCTCTACTTTCTCAGACAGCAACTCAAGGACCTCAGCAGGTTGAGTCCAACCTCAACTTGCCTTCTCTAAATTTGAAAGCCGCAAATCCATCACTCTCATCAATGCACCAATCGAAAAAGGCAAGCTCTTCAGGACTGTCTCCTTCCCCTGAAGTGCTCCAGTTGGTTGCATCTTGTGTTGCTTCCGGCCCTCACCTTCCACCAGTTTCGGGTGCGTCAAGCTTTCTTGAGGGCAAGCTCCCATTGCCAAGGCCTGTTTTAAGAGCCACATTCAAGGACTTAAAAAATGCCTTTGAAAACAAGGAGGCTCATCAGGTTTCACCAAAAACTCGGTGTCCTCCTGAAGACTATACAGTAGAACTCCCTGACAGCGGAGATTCCAGCAAGACTCAGTCGGATCCCACCCGGGTTGAACAGCCCGAAGAAGGTGAGGAGGTGTCATCCGAGGGAACAGTCTCGGATCATGCAGCGAGAGATCAGGAAACACAACCGTAG | 6936 | 0.4334 | MKESNSSAPAMMNSKWVLKRKRRKLPLGQDQSSGKEESNGKDQSNCKEQPNGKEQSNGRDDNSATSDSSRSASAKRMLKTEVATDQSSSKKKGHDGYYYECVVCDLGGNLLCCDSCPRTYHIQCLSPPLKRIPTGKWQCPSCFEENDHPKPMDHLESISKRARTKIAKDKQVGANSLCLEKVSRIFGNKHISKKRSSSKAKPISSLGVKFFDKKPFSSLVDANKPKDPSVGSSIEGTSSCADVDDKKSSASPTVILVDERASSPAREIVSPSKDTNLESNDEQLEGKPDLSCNQIPLKKTVVLAIGVGGEEGRKRKNKDVNNNTSQKKRRTEKGKTFVNTSVKCKSGNNKTPKKKKSVTYSISASGSKEKFGNKNSEVQKKDQMISRLMKDTSNEPDIAGRRADGTLMGEDGAVVESLQVDRVLGCRIQGENANTLQPASLTVSNDSPGDQAISENQNRLLEDNSTDDNDLDADTAENVVDDPQNVIKSSDKEEPLTNSNRVETINVYRRSTTKESKKGSSADSLSKPTDDLGSCPRDSNDQDDSTVSAENLEKASDKMEMEESITVALESKDNSGLPENSEMPAPLETKLKEVDMEKGVSTDVIEKKVLDANVAESSSVNGKKVSYEFLVKWVGKSNIHNSWISESRLKILAKRKLENYKAKYGVSIINICEERWRQPQRVLALRASKDGASEAFVKWTGLPYDECTWESLDEPVLQKSSHLVTLFHKHEALTLERDASKENSARKSNEHRHDIFNLTEQPKELKGGALFPHQLEALNWLRKCWYKSKNVILADEMGLGKTVSACAFISSLYFEFKAKLPCLVLVPLSTMPNWLAEFALWAPDVNVVEYHGCAKARAMIRQYEWHANDPSGVNKKTEAFKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPSSFPSLSSFEEKFNDLTTAEKVDELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKILHKEGHRVLIFSQMTKLLDILEDYLTIEFGPKTYERVDGSVAVADRQTAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEIEDILKWGTEELFNDSPGLNTTETNNNLQDGSTDIAEGDSENDMLGSVKALEWNDEPAEEHGVDESPPDGTDDLCTQNSEKKDDAAMIANEENEWDRLLRVRWEKYQSEEEAALGRGKRQRKAVSYREAYAPHPTETMSESGGEEEKEPEPEPEREYTPAGRALKTKYAKLRARQKERIARKKEAALRPPEEIPGVESLPQLPAKGGDLGAGAMHPVKEGRSITLVDSKSNQLAEAQVQNSNNTDSVSRIERLSKHKMSNHFDGHVNNPSRTLPDIFVPNHHIKGGLSTSNSMPSNNLLPVLGLCAPNANQMESSESNVSKLNWRQSRQGLRQEFPFNLASCSGTSMDPEVRNQEMPPNAKLPDAATENVKQNFKNSIPDSNLPFVPFPPSLKGKESNAFEKSGARFSTFQEKMALPNLPFDERLLARFPLTTKSMANSHLDLLPNLSLGGRFEPLNGSGQELPSMPALPTFKNPPEDLFRYNQQDRDAPPSLGLGQRPTTFPSFPENHRKVLENIMMRTGSGSSSSLKKKSKSDGWSEDELDSLWIGVRRHGRGNWDVMLRDPKLKFSRYKTAEDLSGRWEEEQVKVFQGPAFPVPRSSKMTKSTKSANFPISDGMMERALQGSKFILPPKFQNHLTDMKLGIGESVSGLPHFRTLDRPGLPNDQFVPLPSWSSDKHMAKLPEDGAAESSDRPGTSNAPPEHRFMLSSFGASLGSLGLNCSGGIDIRQKENEQRNRKRGKLPELLDGSSNDLHDNRVNVGNGESTGSGLASNPIRPDLSHSKGDDVAGSSTSKDKLPHWLREAVSPPAKHPDPELPPTVSAIAQSVRMLYGEDKSTIPPFVIPGPPPSLPKDPRCILKKKKKRRSPKFDQGLADFAGSSRDFPSNRDADNGASSSTPSSGPPFPLLSQTATQGPQQVESNLNLPSLNLKAANPSLSSMHQSKKASSSGLSPSPEVLQLVASCVASGPHLPPVSGASSFLEGKLPLPRPVLRATFKDLKNAFENKEAHQVSPKTRCPPEDYTVELPDSGDSSKTQSDPTRVEQPEEGEEVSSEGTVSDHAARDQETQP | 2311 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stsc182g00010 | 2311 | MobiDBLite | consensus disorder prediction | 2282 | 2311 | - | - | |
| Stsc182g00010 | 2311 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 743 | 994 | IPR027417 | - | |
| Stsc182g00010 | 2311 | ProSitePatterns | Zinc finger PHD-type signature. | 101 | 142 | IPR019786 | - | |
| Stsc182g00010 | 2311 | MobiDBLite | consensus disorder prediction | 1995 | 2018 | - | - | |
| Stsc182g00010 | 2311 | MobiDBLite | consensus disorder prediction | 312 | 336 | - | - | |
| Stsc182g00010 | 2311 | MobiDBLite | consensus disorder prediction | 1 | 93 | - | - | |
| Stsc182g00010 | 2311 | Pfam | CHD subfamily II, DUF1087 | 1333 | 1371 | IPR009463 | - | |
| Stsc182g00010 | 2311 | Pfam | PHD-finger | 101 | 143 | IPR019787 | - | |
| Stsc182g00010 | 2311 | PANTHER | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED | 58 | 2235 | - | - | |
| Stsc182g00010 | 2311 | Gene3D | - | 679 | 729 | - | - |
Showing 1 to 10 of 61 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stsc182g00010 | - | - | gmx:100793933 | 3326.95 |
Showing 1 to 1 of 1 entries