Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182g00008 ATGGCTTCGAGGGTTGAGAGCGATGAAGATGGCGATAACAAGGGCAGTATGTGGGATTTGGATCAGAAGCTTGACCAGCCTATGGATGAAGAGGCAGGAAGGCTCAAGAACATGTATAGAGAAAAAAAATTTTCTTCATTGCTGCTTCTGCGGCTTGCATTCCAAAGTCTTGGTGTGGTCTATGGGGATTTGGGCACTTCGCCCTTGTACGTTTTCTACAACACATTTCCTCATGGAGTGAAAGATCCAGAGGATGTAATCGGAGCTCTTTCCTTGATTATCTACTCTCTTACTTTGGTGCCGCTCCTCAAATATGTCTTTGTTGTATTAAGAGCAAATGACAATGGCCAAGGGGGAACATTTGCGCTTTATTCCTTGCTTTGCCGGCATGCCAAGATTAAGACCATTCAAAACCAGCATCGCACCGATGAAGAGCTGACAACGTATAGTCGGTCAACCTTCCATGAAAAATCATTTGCTGCAAAAACCAAGAGATGGTTAGAGGAACAGGCAACTAGGAGGAGTGCCATTCTTATTCTTGTCCTTGTTGGCACCTGCATGGTCATTGGAGATGGGATTCTGACCCCAGCTATATCCGTTTTGTCAGCAGCTGGTGGCATCAAGGTAAATAAGCCACATATGAGTAATGGTGTGGTTGTGCTGGTTGCTGTCGTAATATTGGTCGGGTTTTTCAGCATGCAACATTATGGTACAGATAGAGTTAGTTGGCTCTTTGCTCCAATAGTCCTCCTATGGTTTCTCCTGATTGGAGGCATAGGTATATTTAACATCTGGAAACATGGAAGCAGCGTTCTAAAAGCCTTCTCGCCGGTGTATATATATCACTATTTCAAAAGAGGAGGACAAGGAGGCTGGACTTCGCTCGGTGGTATCATGCTCAGTATAACAGGGACCGAGGCTCTCTTCGCCGATCTAGCTCATTTTCCAGTCTCAGCTGTACAGATTGCATTTACACTGATAGTGTTTCCTTGCCTTCTTTTAGCTTATTCTGGTCAAGCTGCTTACCTTATGAATAACTTGGATCATTCGCAAGATGCATTCTATCGTTCTATTCCAGATAGAATATACTGGCCAGTGTTTGTAGTTGCAACGGCGGCAGCTATAGTTGCAAGCCAGGCCACAATAACTGCAACCTTTTCAATCATTAAGCAAGCCCTTGCTCATGGATGTTTCCCAAGAGTTAAAGTTGTATATACATCAAAGAAATTCCTTGGCCAGATATATGTTCCGGACATTAATTGGATCCTTATGATTCTTTGCATTTCTGTCACTGCTGGTTTTGAAAATCAAAATCAGATTGGTAATGCATATGGTACTGCAGTGGTGATAGTCATGCTGGTTACAACATTCCTTATGATTTTGATCATGATATTAGTGTGGCGTTGCCATTGGATTCTTGTTCTCATCTTCACCGGCTTATCTTTAATTGTCGAATTGACATATTTTTCGTCGGTGCTCTTCAAGATCGATCAAGGTGGATGGGTTCCGTTGGTAATTGCTGGAGCATTTCTTGTTATCATGTATGTTTGGCACTATGGGACGGTGAAACGCTATGAGTTTGAAATGCATAGTAAGGTCTCAATGGCATGGATTCTTGGGCTTGGTCCTAGTTTGGGGCTAGTTCGTGTGCCGGGAATTGGACTAGTCTACACAGAGCTTGCAAGTGGAGTGCCCCACATCTTCTCTCATTTCATCACCAACCTCCCAGCAATCCATTCCGTCGTCGTTTTCGTATGTGTGAAGTATCTTCCTGTCTACACAGTCCCAGAGGAAGAGAGATTCCTTGTGAAGAGGATTGGACCTAAGAATTTCCACATGTTTCGATGTGTGGCGCGATATGGATACAAAGACCTGCATAAGAAAGATGAAAGTTTTGAGAAAAAGCTCTTTGATAACCTTTTCATGTTTGTTCGGCTCGAATCGATGATGGAAGGATGCTCGGATTCGGACGAATACAGCTTATGTGGACCTCAAACAGTGCAGTCAATAGATGGCATGTTGAATAACAATGGAAACACAAAAACTGCATCATCCAACATGGATTTCTCAGTTTCATCCCTGGATTCGATAGAGCCAGCTAAATCTCCGCCACATGTTAAATCCTCGGGTCAAAGAAGCAACCAGACGGAGGTGGACGAACTCGAGTTCTTGAATAACAACAGGGATGCCGGGGTGGTTCACATTCTAGGGAACACAGTGGTGAGGGCAAGGAGAGATTCAAGGTTCTACAAGAAAATAGCAGTTGATTATATATATGCATTCCTTAGGAAGATATGCAGGGAAAATAGTGTGATCTTCAATGTTCCCCATGAAAGTCTCTTAAATGTGGGTCAAATTTTCTATGTATAG 2370 0.4325 MASRVESDEDGDNKGSMWDLDQKLDQPMDEEAGRLKNMYREKKFSSLLLLRLAFQSLGVVYGDLGTSPLYVFYNTFPHGVKDPEDVIGALSLIIYSLTLVPLLKYVFVVLRANDNGQGGTFALYSLLCRHAKIKTIQNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEEQATRRSAILILVLVGTCMVIGDGILTPAISVLSAAGGIKVNKPHMSNGVVVLVAVVILVGFFSMQHYGTDRVSWLFAPIVLLWFLLIGGIGIFNIWKHGSSVLKAFSPVYIYHYFKRGGQGGWTSLGGIMLSITGTEALFADLAHFPVSAVQIAFTLIVFPCLLLAYSGQAAYLMNNLDHSQDAFYRSIPDRIYWPVFVVATAAAIVASQATITATFSIIKQALAHGCFPRVKVVYTSKKFLGQIYVPDINWILMILCISVTAGFENQNQIGNAYGTAVVIVMLVTTFLMILIMILVWRCHWILVLIFTGLSLIVELTYFSSVLFKIDQGGWVPLVIAGAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDESFEKKLFDNLFMFVRLESMMEGCSDSDEYSLCGPQTVQSIDGMLNNNGNTKTASSNMDFSVSSLDSIEPAKSPPHVKSSGQRSNQTEVDELEFLNNNRDAGVVHILGNTVVRARRDSRFYKKIAVDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182g00008 789 Pfam K+ potassium transporter 53 624 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc182g00008 789 MobiDBLite consensus disorder prediction 695 714 - -
Stsc182g00008 789 MobiDBLite consensus disorder prediction 1 20 - -
Stsc182g00008 789 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 41 787 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc182g00008 789 NCBIfam potassium uptake protein 52 788 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182g00008 Stsc-Chr182 41485 46610 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182g00008 1 789 Inorganic Solute Cotransporters AT2G35060 80.350 0.0 1269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182g00008 K03549 - gmx:100776628 1385.93