Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182957g00001 ATGGGTGATGTTGAGGACCCTTCTGCTGGTTTGACCAAGCTCTTGCAAACTGGCTCTCACAATGTCGATTTCGGTTCGGGAGGGTTTGGTGTTGTGGAGCAAGGAGGCTTGGTTATGGACCCTTCTGTGCCTGGGAGTTACCCTGCTTTCCCATTCCTTGGGGCTGAGAACATGGAGGGTCACAATGCAAAGACTGGTGGTGGTGTTTCTGAACCCATCTTTGCTTCAGGTGACAATCCTATGCTGGCTTCCTCGTCACCGGCAGCGGCTCCGGGTGTGTTCGGGTTTCAGCAGCCTCTGTTTGGAACTGTGGATGAGAAGCCTCAGGTTATCAACCCTCAGTTTATGATGAACCATAATCAGGTTCAGTTCTCAGAGAATCCTTCATTCTTTGTGCCATTGACATACCCCCAAATGCAAGAGCAACATGTTGTTTACTCTCAGCAGCCGGCAAAGCGCCCGGCCGTGGGGCACAATTATCAGGGGCCGAGATTGCCCCTTTTGGATTCGGGGCAGGAGCAATTCACCAGGAGGCAGCAGCAACAGGCACAGCTTCCATTGTTTCCTCACCATCTGCAGCAGCAGCAGCAGAAGGTGAGTTCGGCCGGAGACGAGGCGAGCAACCAGCTTCAGCAGACTCTGTTTGATCAGCTATACAAGGCTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCTTGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCCATTGGCAAGCCTTTTCAGAGGGCTGCTCTCTACATGAAGGAGGCATTGCAACTACTGCTCCATTCAAACATTCCAAATTTCATGCCTTTCTCGCCCATCAGCTTCATATTCAAGATTGGAGCTTACAAATCATTCTCAGAGATCTCCCCGGTTCTCCAGTTTGCAAACTTCACTTCCAATCAAGTCCTCATCGAAGCTCTAGAACGGTTCGATCGAATTCACATCATTGACTTTGATATTGGGTTTGGAGTGCAGTGGTCTTCTTTTATGCAAGAGCTTGCCTTGAGAAACAGCACTGCATCTTCTCTTAGGGTTACCGCTGTGGTTTCGCCCTCGACCTGCGACGAGGTTGAGCTCAATTTCACAAGGGAGAATTTAAGTCAATATGCTAAAGACATCAACTTATCTTTCGAGCTCAATATCTTGAACATCGAATCGATGAGCTCTCCGTCGTGTTCCCTGGCTGGACAATTCTTTGATAATGAGGCAGTTGCTGTAAATATGCCACTTTCTTGTTTCACTCATCATCCGTCGTTGGTTCCGTCGGTCCTTCACTTTGTCAAGCAGCTTAGGCCAAAAGTGGTGGTTACTTTAGACCGAAATTGTGACCGAATCGATGTGCCTCTTCCAACCAAGGTAGTCCATGTTCTTCAATATTACTCAGCCTTACTCGAATCGCTTGATGCTGTGAATGTGAACATTGATGTCCTCCAAAAGATTGAGAAGCATTTCATCCAACCATCCATTAGGAATGTGATCACAGGTCACCACCATTACCATTCACAAGACAAGCTACCTCATTGGAGGAACCTGTTTGTTCAATCTGGATTCTCATCATTCACATTCAGCAACTTCACAGAAGCTCAAGCAGAGTGTCTGGTGCAGCGGGCGCCGGTTCGGGGCTTTCAGGTCGAGCGAAACCATTCCTCTCTGGTTCTATGCTGGCAGCGAAAAGACCTCGTCTCGGTTTCGAGCTGGAGATGCTAA 1725 0.4893 MGDVEDPSAGLTKLLQTGSHNVDFGSGGFGVVEQGGLVMDPSVPGSYPAFPFLGAENMEGHNAKTGGGVSEPIFASGDNPMLASSSPAAAPGVFGFQQPLFGTVDEKPQVINPQFMMNHNQVQFSENPSFFVPLTYPQMQEQHVVYSQQPAKRPAVGHNYQGPRLPLLDSGQEQFTRRQQQQAQLPLFPHHLQQQQQKVSSAGDEASNQLQQTLFDQLYKAAELIEAGNPVLAQGILARLNHQLSPIGKPFQRAALYMKEALQLLLHSNIPNFMPFSPISFIFKIGAYKSFSEISPVLQFANFTSNQVLIEALERFDRIHIIDFDIGFGVQWSSFMQELALRNSTASSLRVTAVVSPSTCDEVELNFTRENLSQYAKDINLSFELNILNIESMSSPSCSLAGQFFDNEAVAVNMPLSCFTHHPSLVPSVLHFVKQLRPKVVVTLDRNCDRIDVPLPTKVVHVLQYYSALLESLDAVNVNIDVLQKIEKHFIQPSIRNVITGHHHYHSQDKLPHWRNLFVQSGFSSFTFSNFTEAQAECLVQRAPVRGFQVERNHSSLVLCWQRKDLVSVSSWRC 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182957g00001 574 ProSiteProfiles GRAS family profile. 205 573 IPR005202 -
Stsc182957g00001 574 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 195 569 IPR005202 -
Stsc182957g00001 574 Pfam GRAS domain family 216 573 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182957g00001 Stsc-Chr182957 1 2066 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182957g00001 216 574 GRAS Transcription Factor Family AT4G00150 53.297 4.96e-123 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc182957g00001 GRAS 3.9e-93 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182957g00001 - - gmx:100801785 776.548