Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc182858g00004 | ATGCGTCAATTCTTCAGAGAGTGCACAATTTCCGGCACAGTCGATTTCATCTTTGGCGACGCAACCGCTATCTTTCAAAAATGCAATATACTTGTTAAAAAAGGGTTACAGAATCAAAAGAATACAGTCACCGCACATGGTAGAAAAGATCCTAACGAACCAACAGGGTTCTCGTTACAATTCTGTAACGTAACTGCTGATTCTGACCTCGTTTCTTTCGCTAACACTACTGAATCTTTCTTGGGGAGGCCGTGGAAAATATATTCAAGAACGATTTTTATGCAAAATTATATAAGCGACGTTATAAGGCCTCAAGGGTGGTTAGAGTGGAACGGCAACTTTGCTTTAGACACATTATATTATGCTGAGTATATGAACACGGGTGCCGGTGCCGGTGTAGCTAACAGAGTCAAATGGTCCGGATACCATGTTTTGAATAGTTCAAATGAAGCCAATAATTTTACTGTGGCACAGTTCATTGAAGGAAATTTATGGTTGCCTTCAACGGGTGTAGCATTCACAGCTGGATTAACGGTTTAA | 540 | 0.4056 | MRQFFRECTISGTVDFIFGDATAIFQKCNILVKKGLQNQKNTVTAHGRKDPNEPTGFSLQFCNVTADSDLVSFANTTESFLGRPWKIYSRTIFMQNYISDVIRPQGWLEWNGNFALDTLYYAEYMNTGAGAGVANRVKWSGYHVLNSSNEANNFTVAQFIEGNLWLPSTGVAFTAGLTV | 179 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc182858g00004 | 179 | PANTHER | PECTINESTERASE | 2 | 167 | - | - | |
Stsc182858g00004 | 179 | SUPERFAMILY | Pectin lyase-like | 2 | 176 | IPR011050 | - | |
Stsc182858g00004 | 179 | Pfam | Pectinesterase | 1 | 163 | IPR000070 | GO:0030599|GO:0042545 | |
Stsc182858g00004 | 179 | ProSitePatterns | Pectinesterase signature 2. | 10 | 19 | IPR033131 | - | |
Stsc182858g00004 | 179 | Gene3D | - | 1 | 177 | IPR012334 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc182858g00004 | Stsc-Chr182858 | 11599 | 12657 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc182858g00004 | 1 | 177 | Carbohydrate Esterase | AT3G43270 | 73.446 | 1.38e-99 | 295 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc182858g00004 | K01051 | - | gmx:100814987 | 316.62 |