Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182851g00002 ATGTCCTCTGAGGCAGAAGCTAGAGATGAAACACCCACAGATTCAATTAGTTACAGCTTTGCCGGTCAACGAAGATCCCTTCAACCGGTGGATGAAGGGGCGGGGCCTCAGCTACACCAGCACTTCCTGGATGCGTTGGCGCTCCTCGGAATCAATTACGCGGTGCCAAAGAGGATTATGCAGCTGATGAGCGTAGAAGGATTGACTCGCCAGAATGTTGCAAAACACCTTCAGAAATATCACCTTTGCTTGAAGCGAATTCAAGAGTGTTCCAATGAAGGTCCTTCTTCTTCTTCTTCTAACTAG 306 0.4837 MSSEAEARDETPTDSISYSFAGQRRSLQPVDEGAGPQLHQHFLDALALLGINYAVPKRIMQLMSVEGLTRQNVAKHLQKYHLCLKRIQECSNEGPSSSSSN 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182851g00002 101 FunFam Two-component response regulator 35 88 - -
Stsc182851g00002 101 Gene3D - 35 88 - -
Stsc182851g00002 101 MobiDBLite consensus disorder prediction 1 34 - -
Stsc182851g00002 101 SUPERFAMILY Homeodomain-like 36 86 IPR009057 -
Stsc182851g00002 101 NCBIfam myb-like DNA-binding domain, SHAQKYF class 37 82 IPR006447 GO:0003677
Stsc182851g00002 101 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 36 99 IPR044841 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182851g00002 Stsc-Chr182851 4094 4492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182851g00002 36 98 G2-like Transcription Factor Family AT3G46640 69.841 1.89e-25 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Stsc182851g00002 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182851g00002 - - jcu:105629930 88.5817