Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182835g00003 ATGGAGGAAGTTATTCTTTATCAAGATGCTCACGTCCCAGACAGTTTTGTCCCGGGAGAAGTCCCTGATGGAGCTGTGATTTACGAGCCTCACAAATGTTGGGAGGACATGTATAACGTAATCAATGAAGCAAAACTCTTTATATACATCGTTGGCTGGTCTCTTTGCACTCAGATTTCTTTGGTAAGAGATCTAAATAGGCCACATCCTGGAAGAAGCCAAACACTGGGTGAGTTGCTCAAGAGAAAGGCAAAGATTGATAAAGTTACGGTTGTACTGCTTCTTTGGAATGATATAACTGCGGTCTCGTTTATTGGAAACGATGGACTAATGGATACTCATGATAAGGAAACCCAAAAGTATTTTAAGAACACTGGTGTGCACTGCGTTTTACACACTCGTGGTTGTTTTTCAGACAGTAGTCATCACCAGAAGATTTTGGTGGTGGATAGTAAGTTGCAAAACAGAGAGGAGTCAGATCAAAGAAGAATAGTGAGTTTCATTGGAGGTATCGATCTCTGTAGCGGAAGATATAATACTCTAGGCCATTCACTCTTTAGAACCTTGAACTTGAATGCTGAACACAATAAAGATTTTCATCAACCAAGCATCAAAGGTTCTGCAATTGAGAAAGGTGGTCCTAGGGAGCCATGGCATGACGTGCATTGTAAGCTTGAAGGGCCGATTGCATGGGATGTTTATTCCACGTTTGTTCAGAGGTTTAAGAAAGAGGGCACAAATCAGAGCATGCTTCTTTCAGAAGAAAAGATTAAAGATTTCATTGCTGCACCATCTCAAGTAACGGACCCTGATAATGATGATGACACATGGAATGTTCAGTTATTCAATTATTCGTTAGAGATGAAGAGAATATGA 876 0.4053 MEEVILYQDAHVPDSFVPGEVPDGAVIYEPHKCWEDMYNVINEAKLFIYIVGWSLCTQISLVRDLNRPHPGRSQTLGELLKRKAKIDKVTVVLLLWNDITAVSFIGNDGLMDTHDKETQKYFKNTGVHCVLHTRGCFSDSSHHQKILVVDSKLQNREESDQRRIVSFIGGIDLCSGRYNTLGHSLFRTLNLNAEHNKDFHQPSIKGSAIEKGGPREPWHDVHCKLEGPIAWDVYSTFVQRFKKEGTNQSMLLSEEKIKDFIAAPSQVTDPDNDDDTWNVQLFNYSLEMKRI 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182835g00003 291 SUPERFAMILY Phospholipase D/nuclease 25 243 - -
Stsc182835g00003 291 PANTHER PHOSPHOLIPASE D 3 282 IPR015679 -
Stsc182835g00003 291 Pfam Phospholipase D Active site motif 141 177 IPR001736 GO:0003824
Stsc182835g00003 291 Gene3D Endonuclease Chain A 23 272 - -
Stsc182835g00003 291 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 138 177 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182835g00003 Stsc-Chr182835 9831 10792 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182835g00003 3 282 Phospholipase D Gene Family (Wang group) AT3G15730 52.397 2.18e-96 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182835g00003 K01115 - qsa:O6P43_027874 316.235