Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182835g00002 ATGAACGATAGATCAATGGTTGGTGATAGAGACACGGAGATTGCCATGGGAGCTTATCAACCTAAGCATCTATCTAATGTGGAGGGCTATGCAAGGGGCCAGGTCCATGGCTTTCGCATGTCCCTATGGCTCGAGCACCTTGGCGAGATTGAAGAAATTTTCTTCAATCCTGAAAAGCAAGATTGCATTAAGAAGGTGAATGAGATTGCTCAAAAGAATTGGAAATCGTATTCTGAAAAATCATTTGACAGTGACCTTTCTGGCCATCTGCTCCGCTATCCTGTTGAAGTTTCAAAAGACGGAATACTCAACAACCTCGAAGGATTTAAGTTCTTCCTGGACGCTGACGATGCTGCTATTCTGGGTGATCTGAATTATACTGCACTTTCCCACCTCGTTCCAAAGGAAGTAATGAATGAGAGGGTTGATTCTTATGATTATCTAAGTGATGAGGAGTTTTGA 462 0.4264 MNDRSMVGDRDTEIAMGAYQPKHLSNVEGYARGQVHGFRMSLWLEHLGEIEEIFFNPEKQDCIKKVNEIAQKNWKSYSEKSFDSDLSGHLLRYPVEVSKDGILNNLEGFKFFLDADDAAILGDLNYTALSHLVPKEVMNERVDSYDYLSDEEF 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182835g00002 153 PANTHER PHOSPHOLIPASE D 1 122 IPR015679 -
Stsc182835g00002 153 Pfam Phospholipase D C terminal 51 122 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182835g00002 Stsc-Chr182835 8520 9260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182835g00002 1 122 Phospholipase D Gene Family (Wang group) AT3G15730 56.557 1.01e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182835g00002 K01115 - ini:109165505 137.887