Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182826g00001 ATGTTTTCAGAGACTACCAACTGGGTCATTGGTGCCCTCTTCCTTGCCACTGCATCTACATCTCTAGCAATCTGGAGTATTGCTCAGGCAGCAATTCTTAAAGGATACCCATCTCAGTTGACCATAGTAGCGTTCTACTGCCTGTTTGGAACCATCCAATCTGCAATACTTTCCTTGATAGTAGTTAGAGATCCAAATGCCTGGAAACTAAAGCCTGACATTGAGCTCGTCTCCATATTCTATTCAGCAATTTTTGGAAGTGTTGTCACTTTTTCTGTAATGACCTGGTGCATAAATAGAAAAGGGCCAGTATTTGTGACCATGTTCATGCCTCTAGGGATTGCAATTGCTGCATTCTCAAGTGTTGTCTTCCTTGGTGAAACACTTCATGTTGGCAGCATTATTGGTTCACTGGTGATCATCATCGGATTTTACACAGTACTTTGGGCACAATCCAAAGAAGAAACTGGAGAAGGCCTCGATGTAAATAGACAATCATCCCTGTCTGCACAAGCGAGTCCTCTACTTGAGTCATCATGA 540 0.4278 MFSETTNWVIGALFLATASTSLAIWSIAQAAILKGYPSQLTIVAFYCLFGTIQSAILSLIVVRDPNAWKLKPDIELVSIFYSAIFGSVVTFSVMTWCINRKGPVFVTMFMPLGIAIAAFSSVVFLGETLHVGSIIGSLVIIIGFYTVLWAQSKEETGEGLDVNRQSSLSAQASPLLESS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182826g00001 179 SUPERFAMILY Multidrug resistance efflux transporter EmrE 68 152 - -
Stsc182826g00001 179 Pfam EamA-like transporter family 10 148 IPR000620 GO:0016020
Stsc182826g00001 179 PANTHER WAT1-RELATED PROTEIN 5 163 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182826g00001 Stsc-Chr182826 52 1370 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182826g00001 3 178 Nodulin-like Gene Family AT3G28050 41.176 1.66e-43 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182826g00001 - - gmx:102659936 239.58