Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182821g00001 ATGGGTCTGAAACTCATATGGGTACCCTCCATTTTCATCATTTCCTTGTTCCTAAGTGCTAATTCAGAGGAACAAGTGGTGAAGAAGGCCTTGGTGAAGTTCATGGAAAATCTTGCACCGGATAATAATGCACAGAGAGATTCCAACAACTGGGGCTGGAACCTCACATCAGATCCATGCACTGATCATTGGCACGGTGTGACTTGTCATTCAGACAACAAAACCGTGATGAGCATAGTTGTGGAACATTCAAATCTGAAAGGAGTTCTAGATGCTACTTCTCTTTCCATGGTCAAGTCTCTCATTCTCCTTAGCCTTAAAAACAATAGTCTCCATGATTCTGTTTCTGAAGACATAGGGAACTTGAAGTCCCTAACTCTTCTCTATCTAAATGGTAACCGCTTCTCAGGGAAGCTTCCGGTCTCTATTGGGAACTTACCCAACTTGATGAGGCTTGACGTTTCCGATAACAACTTCTCCGGCGAGATTCCGGAAGAAATGTCCGGCCTATCGCAGTTGAAATCATTTCTTGGAGAGAACAACAACTTCACCGGAACTATTCCTAATTTTGACTTGTCAAGGCTTCAGTTCTTTAATGTCTCAAACAACAACTTACATGGTCCTATTCCTGATGATGGAGGGAAATTCTTTCCAGATAGCTTCTATGGTAATCCTGGTTTGTGTGGAAAGCCACTTGCCAATGCTTGTCCACCTGCATCTGAACCTCCTCTTCCTCGGACGCAGCCATCTCCGAATTCATCTTCGCACCATCACAACAATGTGTCGCTTTATTTAGGATACATAATTCTTTGTTTCTTGGTGTTGGCTTTCTTGGTGCTAACATTGGTTGGAAAATTCAAAACAAAAGACAAAGCAGTGGATGGAAAAGAAAAGAAACTGAAGATAAAAACAGAGGACAAGGCTAGTGAAGCTTATTACAATTCAAGTGGATCAAAGAGTGGAATAGTTGCAATGAGATCAGAGAGTTCAATTTCATCACTGGAAAGCGGCGTGGCTTCTCCGTTGGGTCTTGTGGTGCTCTCAAGCGCGGAGTTTAAGGCTCTGAGATTCGAGGACTTGCTCGGTGCTCCGGCGGAGTTGGTTAGGAGAGGGAAGAATGGAAGCCTCTATAAGGTGATGATGGATAATGGGGTGGTTTTGGCAGTGAAGAGAGTGAAGGATTGTGGGATTTCAAAGCAAGATTTTCAGAGAAGGATGGAGATGATAGCAAAAGTGAAGCATCCAAGAGTGCTTCCACCTCTTGCATATTATTGCTCTCATCAAGAGAAGCTCCTTGTCTATGAATATATGCACAATGGAAGTCTCTTCATGTTGCTTTTTGGAGGATCCCAAAGTGGCGGCCGGAGCCACTCTTTTGGTTGGCGGAGCAGACTAAACGTGGCGGCGAACACGGCGGCAGCACTAGCACACATGCATGAGAATCTGAGAGGAGAGAGTGGCGTATCATCACACGGTAACTTGAAATCAAACAACATCTTATTTGACCACAACATGGATCCATTCATAAGTGAATACGGCCTCCCTGTGACCGAAAACAATCAAGAAAGCCGCATCAGAAACAGCGTGAAAGGTGACATGTACGCCTTCGGTGTGATACTCCTTGAGTTGCTAACAGGAAAAGTGGTTACAAATGATGGGTTTGGTGATGATTTGGCCAAATGGGTGAACTCGGTGGTGAGAGAGGAATGGACGGTTGAAGTTTTTGACAAGTTATTAATCAGAGAAGGTGCATCTGAAGAGAGGATGATGAGTTTGTTGCAGGTAGCATTGAATTGCACCAGTTCTTCTCCAAATGATAGGCCAAGTATGGATCAAGTTGCGATGGTTATAAGATGTCTGAAAGAGGATGAAGAAAAATCAGTGTCCTTCTGA 1893 0.4395 MGLKLIWVPSIFIISLFLSANSEEQVVKKALVKFMENLAPDNNAQRDSNNWGWNLTSDPCTDHWHGVTCHSDNKTVMSIVVEHSNLKGVLDATSLSMVKSLILLSLKNNSLHDSVSEDIGNLKSLTLLYLNGNRFSGKLPVSIGNLPNLMRLDVSDNNFSGEIPEEMSGLSQLKSFLGENNNFTGTIPNFDLSRLQFFNVSNNNLHGPIPDDGGKFFPDSFYGNPGLCGKPLANACPPASEPPLPRTQPSPNSSSHHHNNVSLYLGYIILCFLVLAFLVLTLVGKFKTKDKAVDGKEKKLKIKTEDKASEAYYNSSGSKSGIVAMRSESSISSLESGVASPLGLVVLSSAEFKALRFEDLLGAPAELVRRGKNGSLYKVMMDNGVVLAVKRVKDCGISKQDFQRRMEMIAKVKHPRVLPPLAYYCSHQEKLLVYEYMHNGSLFMLLFGGSQSGGRSHSFGWRSRLNVAANTAAALAHMHENLRGESGVSSHGNLKSNNILFDHNMDPFISEYGLPVTENNQESRIRNSVKGDMYAFGVILLELLTGKVVTNDGFGDDLAKWVNSVVREEWTVEVFDKLLIREGASEERMMSLLQVALNCTSSSPNDRPSMDQVAMVIRCLKEDEEKSVSF 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182821g00001 630 PANTHER OS05G0588300 PROTEIN 10 620 - -
Stsc182821g00001 630 SUPERFAMILY Protein kinase-like (PK-like) 366 615 IPR011009 -
Stsc182821g00001 630 SUPERFAMILY L domain-like 50 209 - -
Stsc182821g00001 630 Gene3D Ribonuclease Inhibitor 191 236 IPR032675 -
Stsc182821g00001 630 Gene3D Transferase(Phosphotransferase) domain 1 437 527 - -
Stsc182821g00001 630 Gene3D Transferase(Phosphotransferase) domain 1 528 628 - -
Stsc182821g00001 630 Pfam Protein kinase domain 370 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc182821g00001 630 ProSiteProfiles Protein kinase domain profile. 362 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc182821g00001 630 Gene3D Ribonuclease Inhibitor 25 190 IPR032675 -
Stsc182821g00001 630 FunFam Nuclear pore complex protein NUP107 24 189 - -
Stsc182821g00001 630 Gene3D Phosphorylase Kinase; domain 1 353 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182821g00001 Stsc-Chr182821 10240 13373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182821g00001 53 621 Receptor kinase-like Gene Family AT1G68400 36.319 8.28e-99 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Stsc182821g00001 Pkinase 3.3e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182821g00001 - - gmx:100787974 680.633