Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182739g00001 ATGGGAAACTCTTGCCAAGAAACTCCACCACTACTCCTCCAAGACCTAAAAGTAACAATCCACCAAGCCTCAATGATTTTTCCCTCCAAACAAACACAAAATAACGATAACAAAAATACTAAGTCTATGTTCTTATCGAACATAGACAAGGTCCTAAACTTCGACGTGGAAACGGTTCATTTTTTCGTGGCGAACAAGGATTATCCCCCAGCCAAGGTTGTAGAGAAGCTCAAGGGCGCCCTAGAAGACGCCCTTGTGGCATACGAGTTCTTGGGAGGGAGATTGAAGCTGAACTCCGAAACCGGGAGATTAGAGGTGGATTGCAATGGAGAAGGTGCTGGCTTTGTGGTGGCTTCAAGTGAGTATAGATTGGATGAGATTGGAGACTTGGTTTTTCCAAACCCAGCATTTTCACAATTTGTTCATAAGACTAAGGATTTCCTCAAACATGGTGATTCTCCATTATGTGTTGCTCAGGTA 480 0.4354 MGNSCQETPPLLLQDLKVTIHQASMIFPSKQTQNNDNKNTKSMFLSNIDKVLNFDVETVHFFVANKDYPPAKVVEKLKGALEDALVAYEFLGGRLKLNSETGRLEVDCNGEGAGFVVASSEYRLDEIGDLVFPNPAFSQFVHKTKDFLKHGDSPLCVAQV 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182739g00001 160 Gene3D - 12 160 IPR023213 -
Stsc182739g00001 160 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 24 160 - -
Stsc182739g00001 160 Pfam Transferase family 16 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182739g00001 Stsc-Chr182739 8132 8687 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182739g00001 16 160 Monolignol Biosynthesis Gene Families AT5G48930 31.544 1.48e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182739g00001 K13065 - gmx:100780971 224.557