Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182735g00003 ATGGATGGTGCGCTTGTTGGTGGAGCTTTTCTCTCTGGCTTCATTAATGTTGTCTTTGACAGGTTCCTCACAACTGATGCTGTCAACTTGGTGTTGGGCAAGAAGCTTGGCTCTGACTTGGTTGAGAGGCTGAAGATCTCTCTTCTTGCTGCTGAAGATGCAGTCTACATTGCTGATGACTTGCTGGACGATGTCCTCACCAAAGCTGCTACTCAAAAGGAGGTACGTTCTTTCTGGTCCATTAGCTTCCTCAACCGGGATAGGGAGATAGTAGATAAGATGGAAGGGGTTGTTAGAAGGATAGAATTTCTTGTAAAGCAAAAGGATTTCCTTGGTCTTCAAAAGATTACTAAGGATGATAGTAACTTGTCATCATCATGGAGAGCATCCACATCTCTGATGGAAGGGAATATATATGGCAGGGAAGATGATCAACAAGCTTTAATCAAAATAATAAATGACAACGTGGAAAGTCAGCTATCTGTGATCCCTATTGTTGGCATGGGTGGGGTTGGTAAAACAACCTTAGCAAAATGGGTGTATAGTTCTGTAAAGGGATTTGATTTGAAAGCATGGGTTTGCATCTCTGAAACATTTGATATTGTTGAGGTTACAAGGACAATCATTGAAGAAATCACTAAAAGTACTTGTACCATTCGGAGTTTAAATTCACTTCAGAATGAATTGCAGGAAATCTTGTCAGAAAAGAAGTTCTTTATTGTTCTAGACGATGTCTGGTGCGATGATGCCAATAACTGGAAGCAATTTAAAACTCCTTTTCAATGTGGGGCTAAGGGTAGTATGATTCTTCTAACAAGTCGCATTAAAGAGGTTGCTTCAGTAGTTCAAACATGTCCCTCTTACTTTCTTAATGAGTTGTCGGAAGACTATTGTTGGTTACTTTTTGCAGACAATGCATGTTTTCCGGAGTCAAAGGGGAATACAGCACTAGAGGAAATTGGTAGAAAGATTGTCCAGAAGTGTAAAGGATTGCCATTAGCTATAGAAACACTTGGGCGCTTGTTGCGAGGAAAGGATGATGTTAAAGAATGGAATGCTGTTCTAATGAGTGACATTTGGGAATTTTCTATGAAAAATAGTAGAATTATTCCAGCATTGTTAATAAGCTACTTCCAGCTCCCTTCCTATTTAAAGCGTTGCTTCATTTATTGTTCATTGTATCCCAAAGATCACCACTTTTACAAAGATGAACTAGTGTTGTTATGGATGGCTGAAGATCTTTTAAGGCCATCAAAGAGAGGAGAGAGTTTAGAAGAAGTTGGCAGCAAGTGTTTTGAAGAATTAGTTTCCAGGTTATTTTTTAAACAAGATAGGTATTTTATTAAGATGCATGATCTATTGCATGACCTGGCAATTTTCCTTGCTGGAGACTTCTATTGTAGATTAGAAGAGCATAGCAAAGCAAAAGGCGTGACTAATTTGACTCGGCATATGTCCTTTAAAGGATTGCATAATGTGATCTCAGAAAATTTTGATTCCATCGGTGAAGCTAAATCTTTGAGGACATTCTTGCCGGTCAGTTGGTTTTCTCAATGCAGCTTCGATTGTGGTGCAAGTTTCCATGCCTTAATGGAGCTCAAATATTTGAGAGTTTTGTCATTTGACATGTTCACAAAACTTGATGCATTACCTGATTCAATAGGTGAATTGATTCATCTTCGCTATTTGAATCTCTCTGGGACTCACATTAATAGGTTGCCAGAAACATTGTGTAACTTGCATAATCTACAAACATTAATATTGTGTGCATGTACTAGATTGACCATGTTGCCTAGTGGCATGCATAATCTTGTGAATTTACGTTGCCTTGATCTTAGGGAAACTTGTTTGGAAGAAATGCCTGGAGGAATAAGCAAATTGAAACAAATGCGTATTTTCGATTACTTCATCGTTGGAAGGCATGAAGATAATGGAATCCAAGAATTAGGAGGGCTCTCGAATCTTCATGGGTCACTTGATATCAAGAAATTGGAGAATATTGTTGATGTGAATAAAGCAAAGAGTGCGAGGATGATGGATAAGAAGCACCTTGACAACTTATGGTTGGAATGGTCTTCAGGCAATGATATGGTTCCAAATACACAAACTGAAAGAGAGATATTGGACAGCTTGCAACCGCACAATGGCTTGAAAGAGTTGATAATCAAGGGATACAAGGGTACAATGTTTCCAAATTGGACAGGACATTGTTCCTACCAAAACATGACTCATGTATCTCTAGAGTCTTGCAACAATTGCTGCATGTTGCCTTCACTTGGACAGCTGCCATCTCTTAAGTCCCTCTGCATTCAAGGTTTTGATCAGCTGAGGAGTGTTGGCATGGAGTTTTACAAGAATGAAGGAGATCATCAGTCTTCGCATATTGCACCGTTTCCCTCACTGGAGAGTTTGGAGTTTGATAAAATGCCAAGTTGGGAAATGTGGCACATATGTGACTCGGAAACTTTTCTTCAACTCAGGAACCTTCAAATAAGAAATTGTGGAATGTTAAAGGGAGATATGCTTAAACAGGTATTCTTCAGAATCGTTTCTTCTTTGGCAGATGTTTCTAGAGTTTCCAAACTGCAAATTTGGGAAGTAACGTCTCGGCAGATGTTACTTAATGGGGATAGGTTATCAATTAGGGGATGTAAATTTTTGGTGGAGTTTGCATTTAACGCAATGATCAGCATCAACCATCTAAGTTGCATCCGAGAAATAGAAATCTCAGGGTGTTCGTTTGCTGCACCCTTTCCAGGCAATTGTTTACCCAAATCTTTGCAAAAGCTTGTGATCATGTTTTGCAGCAAACTGGAATTCCCCCCGCAACAACAACAACAAAATTCTGATTTGGTGGAGCTACATATAGAATACAGCTGCGTTTCACTTGCCTCATTGTCTTTGGATGCCTTTCCCAAGCTGAAGACACTCGGGATATCAAATTGTAAGAATCTGAAATCAGTTTCAATGTCTGAGCCACCACACACTGCTCTTCAACGTCTCGCCATCCATGAATGCCCCAAATTCGTGTCAATTTCAGGAGGAGGACTAGCTTCACCCAACTTGACTCATCTCGATGTCAGCTTCTGCTCAAACTTGGAGGCATTGCCATGTGACATGAATACTCTTTTCCCAAGTTTATTGTCTCTCGACATACATGGTTGCCCGAAAATCCATAGGTTGCCAGAGGATGCTTTGCTGCCTAACCTGAAACAACTCACTGTGGGAGGTTGCAAGTCACAACTAAGGGGTCTATCAGCCATGGGCAACTTAGAAGCCCTCACTCATCTCACCATTTATGATGATACCTTTGAGACCATAACAAAGTCATACCCACAAGTTGGTTCGCTGCCTCACCTTCCATCACTTACCACTTTACGTCTCTATGACTTTTTTAGTCTAGAGACGTTGGAATGCAACCAGCTTTCCCCCCTCATCTCCCTCCAAGAGTTAGTTATACAAGACTGTTCAGGACTGGAGAATGTGGCAGGAGAAAAGCTGCCTTCCTCTCTCTTACTATTTCATATTATAAGATGTCCTTTGCTGGGAGAAAACTGCGAGAACAAGCGTCAACAAATTTGGCCCAAAATTTCCCACATTCCCACCATTCGAGTTAACAGTCGCAAAATTGTCTGA 3636 0.404 MDGALVGGAFLSGFINVVFDRFLTTDAVNLVLGKKLGSDLVERLKISLLAAEDAVYIADDLLDDVLTKAATQKEVRSFWSISFLNRDREIVDKMEGVVRRIEFLVKQKDFLGLQKITKDDSNLSSSWRASTSLMEGNIYGREDDQQALIKIINDNVESQLSVIPIVGMGGVGKTTLAKWVYSSVKGFDLKAWVCISETFDIVEVTRTIIEEITKSTCTIRSLNSLQNELQEILSEKKFFIVLDDVWCDDANNWKQFKTPFQCGAKGSMILLTSRIKEVASVVQTCPSYFLNELSEDYCWLLFADNACFPESKGNTALEEIGRKIVQKCKGLPLAIETLGRLLRGKDDVKEWNAVLMSDIWEFSMKNSRIIPALLISYFQLPSYLKRCFIYCSLYPKDHHFYKDELVLLWMAEDLLRPSKRGESLEEVGSKCFEELVSRLFFKQDRYFIKMHDLLHDLAIFLAGDFYCRLEEHSKAKGVTNLTRHMSFKGLHNVISENFDSIGEAKSLRTFLPVSWFSQCSFDCGASFHALMELKYLRVLSFDMFTKLDALPDSIGELIHLRYLNLSGTHINRLPETLCNLHNLQTLILCACTRLTMLPSGMHNLVNLRCLDLRETCLEEMPGGISKLKQMRIFDYFIVGRHEDNGIQELGGLSNLHGSLDIKKLENIVDVNKAKSARMMDKKHLDNLWLEWSSGNDMVPNTQTEREILDSLQPHNGLKELIIKGYKGTMFPNWTGHCSYQNMTHVSLESCNNCCMLPSLGQLPSLKSLCIQGFDQLRSVGMEFYKNEGDHQSSHIAPFPSLESLEFDKMPSWEMWHICDSETFLQLRNLQIRNCGMLKGDMLKQVFFRIVSSLADVSRVSKLQIWEVTSRQMLLNGDRLSIRGCKFLVEFAFNAMISINHLSCIREIEISGCSFAAPFPGNCLPKSLQKLVIMFCSKLEFPPQQQQQNSDLVELHIEYSCVSLASLSLDAFPKLKTLGISNCKNLKSVSMSEPPHTALQRLAIHECPKFVSISGGGLASPNLTHLDVSFCSNLEALPCDMNTLFPSLLSLDIHGCPKIHRLPEDALLPNLKQLTVGGCKSQLRGLSAMGNLEALTHLTIYDDTFETITKSYPQVGSLPHLPSLTTLRLYDFFSLETLECNQLSPLISLQELVIQDCSGLENVAGEKLPSSLLLFHIIRCPLLGENCENKRQQIWPKISHIPTIRVNSRKIV 1211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182735g00003 1211 Gene3D Ribonuclease Inhibitor 1020 1194 IPR032675 -
Stsc182735g00003 1211 Gene3D Ribonuclease Inhibitor 516 674 IPR032675 -
Stsc182735g00003 1211 Gene3D Ribonuclease Inhibitor 675 847 IPR032675 -
Stsc182735g00003 1211 Gene3D Ribonuclease Inhibitor 858 1017 IPR032675 -
Stsc182735g00003 1211 Gene3D - 292 375 IPR042197 -
Stsc182735g00003 1211 SMART LRR_typ_2 557 580 IPR003591 -
Stsc182735g00003 1211 SMART LRR_typ_2 604 627 IPR003591 -
Stsc182735g00003 1211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 391 IPR027417 -
Stsc182735g00003 1211 Pfam NB-ARC domain 142 355 IPR002182 GO:0043531
Stsc182735g00003 1211 Gene3D - 126 287 IPR027417 -
Stsc182735g00003 1211 SUPERFAMILY L domain-like 449 887 - -
Stsc182735g00003 1211 PRINTS Disease resistance protein signature 232 246 - -
Stsc182735g00003 1211 PRINTS Disease resistance protein signature 162 177 - -
Stsc182735g00003 1211 PRINTS Disease resistance protein signature 969 985 - -
Stsc182735g00003 1211 PRINTS Disease resistance protein signature 328 342 - -
Stsc182735g00003 1211 PANTHER DISEASE RESISTANCE PROTEIN RP 87 841 IPR044974 GO:0006952
Stsc182735g00003 1211 FunFam Probable disease resistance protein At1g63360 377 460 - -
Stsc182735g00003 1211 Gene3D - 376 459 IPR036388 -
Stsc182735g00003 1211 FunFam Probable disease resistance protein At1g61300 123 285 - -
Stsc182735g00003 1211 SUPERFAMILY L domain-like 898 1198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182735g00003 Stsc-Chr182735 4999 9493 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182735g00003 163 345 WRKY Transcription Factor Family AT5G45050 28.571 1.69e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182735g00003 - - adu:110277908 1436.78