Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182644g00003 ATGGCTGAGAGCGGGGAAGAGAAGTTACTTGCTGTGGCGCGGCACATAGCCAAGACGCTGGGGAACGACAATCGGACCGTTGCAGAAGACATACTCCAAATATTCTCAAACTTCGATGCTCGATTCTCCAAAGAGAAGCTTTCTGATCCACTGGGCTGCGCCGCACTGGAACAAACCCTCCACGCACTCGATGAACGCATCTCGCGCCACGTGTCCTCACGAAACAATGAAAACAACCGGGAAATCTTTTCCCTCAACACCGTCGCCTTCCTCGCTGCCGTCGACGAGCTCATCGCCACCATCAACAGATGGAAGCCTCTCGCTGCTGATGAGACTGTTAACGCGTGCCTCTCACGTGCTGACGACATGCTCCGTCAAGCTATGCTTCTAGCAGAAGACGAGTTCCGCTCACTCATGAACGAGTCAACTCGGAACTCGTCGTTTGACTCGGATGAAGGAGGCGAATTCGAAGAAGGAGATGAAGCTTGTGGCAGCGGCGTGGAACGGGCTGCTGGAGATGATGTGGTGATTGATGTGTTGCCGGCGGGTACGGTGATCGATCTCCGGGAGATAGCGACGCGCATGGTGGAGGCGGGGTTTGGAAATTCGTGCGCGCGCGTGTACGGTGGTTGCCGGAGGGAGTTCCTAGAAGAGAGCTTCTCGAGGTTAGGGTTTCGGAATCTTAGCGCTTCGGAGATTCAGGAGATGCCGTGGCAGGATCTTGAAGACGAGATCGAGCGGTGGATCAACGCCTCCAATGTCTCACTTAGGATCCTCTTCCCCAGCGAGCGCCGGCTGTGCGATCGCGTCCGCTCGCCAGAGCAGTTGTTCCGAATCCTCCACGTGTTCGACACAATGCGTGAACTAATTCCCGAATTTGCATCGCTCTTCTCCGATTCACAATGTGAGACAGAAGCAATTGAAGTTTGGAAGCGATTGGGGGAAGCAATCAAGGAAATTTTTGTGGAATTGGAAAACCTGATTCGCCACGATCCGGCGAAAGCAGCGATTCCCGACGGTGGGCTTCACCCTATCACTAAATACGTGGTGAATTACCTTGTAGCCGCATCCCAGTCGAGGCGAACCTTGGAACTAGTTTTCCAAGGCGATTTTCTTCCATTGAAGGATTTCATCACTATGGTTGATGATAATAAGCATCAATCTAATTCTCATTTTTGTGCTCAACTGTGTTGGATAATGGACTTGTTAGAGAGCAATTTGGAAGCCAAGTCCAAATTCTACAAGGACCCTGCATTGTGCTCTGTTTTCATGATGAATAATTTGAGGTACATTGTTCAGAAGGCCAAAAACAGCGAATTGGGTCCCATTTTGGGTGATGATTGGATCCGTAACCACACTGCGAAAATTCGACGATTTCATGTGAGCTACCAGAGGAGCTCATGGAGCAAGGTGGTGGGGTTCTTGAAGGTTGAGACCAGCAGTGATGTGACAATGTCAGCAGGGTCTAGTGTTGTTGAGGCAAAGGCTATGAAGGAGAAGCTCAAGATGTTCAACTTGCACTTTGAGGAGATTTGTAGGGTTCAATCTCATTGGGTTGTGTTCGATGAGCAGCTTAGGGAGGAAATCAGAATTGCACTGGAGAAGATCTTGTTGCCTGCCTATGGAAGCTTCATTGGAAGGTTCCACAGTGTTCCGGAACTCGGCAAGTATGTCGAGAAGTATGTAAAGTACAGTGTGGAGGACATTGGAGAACGGCTTAACGATTTGTTTCAAGGAGAAAATAGTACATTAGAAGTTTCACATCGCTTTAAGATATGGCTATGA 1785 0.4975 MAESGEEKLLAVARHIAKTLGNDNRTVAEDILQIFSNFDARFSKEKLSDPLGCAALEQTLHALDERISRHVSSRNNENNREIFSLNTVAFLAAVDELIATINRWKPLAADETVNACLSRADDMLRQAMLLAEDEFRSLMNESTRNSSFDSDEGGEFEEGDEACGSGVERAAGDDVVIDVLPAGTVIDLREIATRMVEAGFGNSCARVYGGCRREFLEESFSRLGFRNLSASEIQEMPWQDLEDEIERWINASNVSLRILFPSERRLCDRVRSPEQLFRILHVFDTMRELIPEFASLFSDSQCETEAIEVWKRLGEAIKEIFVELENLIRHDPAKAAIPDGGLHPITKYVVNYLVAASQSRRTLELVFQGDFLPLKDFITMVDDNKHQSNSHFCAQLCWIMDLLESNLEAKSKFYKDPALCSVFMMNNLRYIVQKAKNSELGPILGDDWIRNHTAKIRRFHVSYQRSSWSKVVGFLKVETSSDVTMSAGSSVVEAKAMKEKLKMFNLHFEEICRVQSHWVVFDEQLREEIRIALEKILLPAYGSFIGRFHSVPELGKYVEKYVKYSVEDIGERLNDLFQGENSTLEVSHRFKIWL 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182644g00003 594 SUPERFAMILY Cullin repeat-like 84 577 IPR016159 -
Stsc182644g00003 594 Pfam Exo70 exocyst complex subunit 271 575 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc182644g00003 594 PANTHER EXOCYST COMPLEX PROTEIN EXO70 271 579 IPR004140 GO:0000145|GO:0006887
Stsc182644g00003 594 Gene3D Exocyst complex component Exo70 67 585 - -
Stsc182644g00003 594 MobiDBLite consensus disorder prediction 141 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182644g00003 Stsc-Chr182644 8552 10469 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182644g00003 1 582 EXO70 exocyst subunit family AT5G58430 51.163 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182644g00003 K07195 - ahf:112719926 1024.62