Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182644g00001 ATGGTTAATTGTATGAAACATAGTAAATTAGGAGAGTTGTTTGGAGAAAATTGGATCAAGAATAACATCATAGCAAAATTTCGCCAATGTTATGGAAATTACAAGGCAAATTCATGGGATCAAGTATTCAGAAAGAAGCTTAGTGTTGGAGAGTTTGTGGTGGAATTTGAGGAGATATGTGATGTGCAATCAACTTGGATTATCTTTGATGATCAACTTAGAAGGAAAATTAGAAATAACTTTAAAGAAACATTGTTGGAAAGAATCAAAAGGGTTATTGAAAGGTCACAAGAAGAAGTTAATATTTGTGGTGACTCTGGGTTTGAAGTCAAAGATATTGTGGCAGGAATAGATAAGTTGTTTAAGGGAAGAGATGAGCTCAAAAACCACAAAGATTTGCATCCAACATGGACTGCAGCCTGGCATGAGCACAATATCAAGGATTTTCATAAATATTGGAAGAAGCATGCTCAGAAAACATTGCTTGGCTCTTCTTATCCAATGTAA 507 0.3452 MVNCMKHSKLGELFGENWIKNNIIAKFRQCYGNYKANSWDQVFRKKLSVGEFVVEFEEICDVQSTWIIFDDQLRRKIRNNFKETLLERIKRVIERSQEEVNICGDSGFEVKDIVAGIDKLFKGRDELKNHKDLHPTWTAAWHEHNIKDFHKYWKKHAQKTLLGSSYPM 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182644g00001 168 Coils Coil 79 99 - -
Stsc182644g00001 168 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 123 IPR004140 GO:0000145|GO:0006887
Stsc182644g00001 168 Pfam Exo70 exocyst complex subunit 1 97 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc182644g00001 168 Gene3D Exocyst complex component Exo70 1 131 - -
Stsc182644g00001 168 SUPERFAMILY Cullin repeat-like 2 101 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182644g00001 Stsc-Chr182644 2164 3086 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182644g00001 6 122 EXO70 exocyst subunit family AT1G07000 32.576 6.04e-15 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182644g00001 K07195 - aip:107644445 216.083