Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182600g00002 ATGGTTAACTTTGTTGTTCAACCCACAATGATTGATGGTTGGATTAGAATGGATGAGTGGATTTGTGGGGAAAAGAACTCAGTATTTGAAATTGCCTATGGAGTTAGTTTGTGGGATTTCTTTGCAAGCAACAATGAACAAATGAATATTTTCAATGAGGCTCTGGCAAGTGATTCTCAAATGATGAACTTGGCATTGGGAGATTGCAAATCAGTGTTTGAAGGGATAGAATCCATTGTGGATGTTGGTGGTGGAAATGGAGCCACCGGTAAAATAATCTCTAAGGCATATCCTGAGTTACAATATATTGTGTTTGATCTTCCATCAGTTGTAGCAAATTTGCAGGGAATTCGTAATTTGAGCTATGTTGGTGGAGACATGTTTAAATCTATTCCAGAAGCTGATGCAGTCCTCTTAAAGTGGGTTTTACACGATTGGAATGATGACTATTGCATAAAGATATTAAAAAATTGCAAAGAATGTATTTTGAGAAAAGGAAAAGGAGGAAAAATTATCATCATCGACGTAGTGATAAATGAAGAGCAAGACAAATATGAAACAACTCAAGTTAAACTTCTTTTGGATATGACCATGGCGGCTAGTCATAATGCAAAAGAACGAACCGAAAAAGAGTGGAAAAAACTCTTCATAGAATCGGGTTTCAATCACTACAAAATATCTCCTATATTTGGTTTTAGATCTCTTATTGAACTCTATATTGTTTAA 726 0.3526 MVNFVVQPTMIDGWIRMDEWICGEKNSVFEIAYGVSLWDFFASNNEQMNIFNEALASDSQMMNLALGDCKSVFEGIESIVDVGGGNGATGKIISKAYPELQYIVFDLPSVVANLQGIRNLSYVGGDMFKSIPEADAVLLKWVLHDWNDDYCIKILKNCKECILRKGKGGKIIIIDVVINEEQDKYETTQVKLLLDMTMAASHNAKERTEKEWKKLFIESGFNHYKISPIFGFRSLIELYIV 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182600g00002 241 Gene3D Vaccinia Virus protein VP39 1 239 IPR029063 -
Stsc182600g00002 241 Pfam O-methyltransferase domain 14 222 IPR001077 GO:0008171
Stsc182600g00002 241 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 238 IPR029063 -
Stsc182600g00002 241 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 240 IPR016461 GO:0008168
Stsc182600g00002 241 PANTHER O-METHYLTRANSFERASE 17 225 IPR016461 GO:0008168
Stsc182600g00002 241 FunFam O-methyltransferase ZRP4 1 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182600g00002 Stsc-Chr182600 11414 13500 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182600g00002 10 238 Monolignol Biosynthesis Gene Families AT5G54160 37.069 2.16e-44 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182600g00002 K22588 - gmx:100779638 282.722