Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1825g00001 ATGTTCTCCATCAAAATCCTTGATTCAAGCCAAGAACTTAGGAGCAAGAAGGTGCAAGAACTCATTAGTGATGTTCATGCATGTAGTTTGAATGGTGAAGCAATTGAAATTGGAAGGCTATCATTTAAGATGCTAATGAATTTATTGTCAAACACATTTTTCTCCATGGATCTTGTTGAATCTGTAGGTGAAATTGATGAGTACAAGGACATGGTGGTGAATTTGGCTAAAGCAATTGCAACACCAAACTTGGGAGATGTTTTTCCATTGTTGAAGATATTTGACCTACATGGCATAAGGTGGACTTCAAAAACTTACATTCCCATGTTGTTTGGTATTTTTAATGGCCATATTGAGAAAAGGTTGAAGCTAAGAGAAGAAGAGAATTATATAGCAAAGTCAAAGAAGGATGTCTTAGAGGAACTGCTCAACATTTCTCAAGAGAATGGCCACAAGATGGACAAAGAGAAGATCAAACATTTGTTCTTGGATCTAATCATTGCTGGAATAGATACAAGTTCATATGTAGTGGAACGAGCAATGACTGAACTACTTCACAACCCAGATATAATGTTAAAAGCAAAAATGGAGCTAGAGCAAACAAATGGAATAGGTAACCCTGTTGAGGAATCACAAATTGAAAATCTTCCATACTTAGAAGCAATAATTAAAGAGACCTTACGTAAGTACCCACCAGCGCCGTTTTTGTTGCCAAGAAAAGCCAAAGAAACTGTTGAAATTCATGGCTACATTATTCCAAAAGGTGCACAAGTTATAATCAACGAATGGGCCATTGGCAGAAACCCTAAAATATGGGATGATCCAAATTTGTTTTTGCCAGAGAGGTTCTTGGGGTCAAACATTGATTATGTCAAAGGGCATGATTGTAATTTCACACCGTTTGGCGGTGGAAGGAGAATTTGTCCTGGAATGAAACTTGCTACAAGGATGTTGCATCTTATGTTGGGGTCAATGGTCAACTCTTTTAACTGGAGACTTGAAAATGATATCAAGCCGGAGGATATGGACTTGGATCAAGAACTAAGAGCAATTGCTGTTAGAGTAAATTAA 1071 0.3735 MFSIKILDSSQELRSKKVQELISDVHACSLNGEAIEIGRLSFKMLMNLLSNTFFSMDLVESVGEIDEYKDMVVNLAKAIATPNLGDVFPLLKIFDLHGIRWTSKTYIPMLFGIFNGHIEKRLKLREEENYIAKSKKDVLEELLNISQENGHKMDKEKIKHLFLDLIIAGIDTSSYVVERAMTELLHNPDIMLKAKMELEQTNGIGNPVEESQIENLPYLEAIIKETLRKYPPAPFLLPRKAKETVEIHGYIIPKGAQVIINEWAIGRNPKIWDDPNLFLPERFLGSNIDYVKGHDCNFTPFGGGRRICPGMKLATRMLHLMLGSMVNSFNWRLENDIKPEDMDLDQELRAIAVRVN 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1825g00001 356 PRINTS E-class P450 group I signature 308 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1825g00001 356 PRINTS E-class P450 group I signature 177 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1825g00001 356 PRINTS E-class P450 group I signature 157 174 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1825g00001 356 PRINTS E-class P450 group I signature 298 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1825g00001 356 PRINTS E-class P450 group I signature 220 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1825g00001 356 PRINTS E-class P450 group I signature 261 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1825g00001 356 PRINTS P450 superfamily signature 299 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1825g00001 356 PRINTS P450 superfamily signature 221 232 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1825g00001 356 PRINTS P450 superfamily signature 168 185 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1825g00001 356 PRINTS P450 superfamily signature 308 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1825g00001 356 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 347 - -
Stsc1825g00001 356 SUPERFAMILY Cytochrome P450 1 342 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1825g00001 356 Pfam Cytochrome P450 9 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1825g00001 356 Gene3D Cytochrome P450 1 354 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1825g00001 356 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 301 310 IPR017972 GO:0005506|GO:0016705
Stsc1825g00001 356 FunFam Geraniol 8-hydroxylase 107 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1825g00001 Stsc-Chr1825 6263 8031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1825g00001 1 356 Cytochrome P450 AT2G45550 41.899 1.44e-101 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1825g00001 - - aip:107610932 551.592