Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182595g00004 ATGCTTGGTAGAGATCAACCAAGTGCCTTGGTGTACGACAGGTATGAGACCAATGGCAAACACCACCACAACGAAAACATTTATTCTCCGTTTTCTTATTATGCCCATTATTCCTTTCCCACTTCAGCACAGCTTAGTCCCAACCATTATGCTAGTATCTGCCCCAGTGTTGAAGCCATCGTTAGACAAGCTGTTCAAAAGAAATTCCAGCAAACCTTTGTCACTGTTCCTGCCACCCTCCGTCTCTTCTTCCATGACTGCTTTGTCCAGGGTTGTGATGGTTCAGTGTTGGTAGCATCAACAGCTGGAAACCAAGCAGAGAAGGATCACTCGGATAATTTGTCATTGGCTGGAGATGGATTCGACACAGTTATCAAAGCAAAAGCAGCGGTTGATGCTGTCCCTCAATGCAGAAACAAAGTCTCTTGTGCTGATATTCTTGCTTTGGCAACCCGTGATGTCATTGCTCTGGCCGGTGGACCTTCATACAGAGTTGAATTGGGAAGATTTGATGGGTTAGTTTCAAGAGCTTCAGATGTAAATGGAAGGTTGCCACAACCAAACTTCAACTTGAATCAACTCAATTCTCTCTTTGCTGCAAATGGCCTCACCCAAACTGATATGATTGCCCTCTCAGGTGCACATACCCTTGGATTCTCACATTGCAGTAGGTTCTCAAACAGAATCTACAGCACCCCAGTGGACCCCACACTAAACAAGCAATACGCTGCACAGCTTCAACAAATGTGCCCAAGAAACGTGGATCCAAGAATAGCCATCAACATGGACCCAAACACACCTCGCACCTTTGACAACGTTTACTACAAGAACCTTCAGAGCGGACAGGGTCTCTTTACCTCTGATCAGATCCTCTTCACTGATCAAAGGTCTAGAGCCACTGTTAATTCTTTTGCCTCTAATGCCAATGTCTTCAACTCCAACTTTGTTAATGCAATCACCAAGTTGGGTCGGATTGGGGTTAAGACTGCCCGCAACGGAAAGATCCGTACAGATTGTTCCGTTCTTTAA 1029 0.4529 MLGRDQPSALVYDRYETNGKHHHNENIYSPFSYYAHYSFPTSAQLSPNHYASICPSVEAIVRQAVQKKFQQTFVTVPATLRLFFHDCFVQGCDGSVLVASTAGNQAEKDHSDNLSLAGDGFDTVIKAKAAVDAVPQCRNKVSCADILALATRDVIALAGGPSYRVELGRFDGLVSRASDVNGRLPQPNFNLNQLNSLFAANGLTQTDMIALSGAHTLGFSHCSRFSNRIYSTPVDPTLNKQYAAQLQQMCPRNVDPRIAINMDPNTPRTFDNVYYKNLQSGQGLFTSDQILFTDQRSRATVNSFASNANVFNSNFVNAITKLGRIGVKTARNGKIRTDCSVL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182595g00004 342 ProSiteProfiles Plant heme peroxidase family profile. 44 342 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc182595g00004 342 PRINTS Haem peroxidase superfamily signature 76 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc182595g00004 342 PRINTS Haem peroxidase superfamily signature 263 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc182595g00004 342 PRINTS Haem peroxidase superfamily signature 141 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc182595g00004 342 PRINTS Haem peroxidase superfamily signature 159 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc182595g00004 342 PRINTS Haem peroxidase superfamily signature 207 222 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc182595g00004 342 Gene3D - 48 341 - -
Stsc182595g00004 342 Pfam Peroxidase 61 307 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc182595g00004 342 PANTHER - 36 341 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc182595g00004 342 PRINTS Plant peroxidase signature 159 174 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc182595g00004 342 PRINTS Plant peroxidase signature 78 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc182595g00004 342 PRINTS Plant peroxidase signature 261 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc182595g00004 342 PRINTS Plant peroxidase signature 54 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc182595g00004 342 PRINTS Plant peroxidase signature 206 218 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc182595g00004 342 PRINTS Plant peroxidase signature 119 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc182595g00004 342 PRINTS Plant peroxidase signature 277 294 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc182595g00004 342 PRINTS Plant peroxidase signature 317 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc182595g00004 342 PRINTS Plant peroxidase signature 140 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc182595g00004 342 SUPERFAMILY Heme-dependent peroxidases 44 341 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc182595g00004 342 CDD secretory_peroxidase 44 341 IPR033905 GO:0004601|GO:0042744
Stsc182595g00004 342 Gene3D Peroxidase, domain 2 185 322 - -
Stsc182595g00004 342 FunFam Peroxidase 185 322 - -
Stsc182595g00004 342 ProSitePatterns Peroxidases proximal heme-ligand signature. 207 217 IPR019793 -
Stsc182595g00004 342 FunFam Peroxidase 48 194 - -
Stsc182595g00004 342 ProSitePatterns Peroxidases active site signature. 76 87 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182595g00004 Stsc-Chr182595 9030 15359 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182595g00004 39 339 Peroxidase AT5G67400 68.404 6.97e-157 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182595g00004 K00430 - gmx:100817540 533.487