Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182594g00003 GGTTGTGATGGATCAGTGCTGCTTGATGACACATCCTCCTTCAAAGGAGAGAAGACTGCACTTCCAAACAATAATTCACTGAGAGGCTTTGAAGTTATTGATGCCATTAAAGCTAAGGTTGAGTCTGTGTGCCCTGGTGTCGTCTCTTGTGCTGATATCCTTGCCATTACAGCTCGTGATTCTGTTCAACTTCTTGGAGGGCCTAATTGGAATGTAAAACTAGGAAGAAGGGATTCAAAGACAGCAAGCTTGGCAGCTGCAAACAGTGGTGTGATTCCAGCACCAACTGCTACCTTAAGCCAACTTATCTCAAAGTTTCAAGCTGTAGGCCTCTCTGCTAGGGACATGGCTGCCTTATCTGGAGCACACACAATTGGGAAGGCAAGGTGCACTATCTATAGAAACCGGATATACAATGACACAAACATTGACAGAACATTTGCCAATGCAAGGAAGAAGAACTGTCCAAGGATTACAGGCACACCAAAGGACAACAATGTTGCACCCTTGGACTTCAAAACCCCCAACCGTTTTGACAACAGCTACTACAGCAACCTCTTGAGCAAAAAGGGTCTCCTTCATTCTGATCAAGAACTCTTCAATGGTGGATCCACTGATTCCTTGGTTAGAACTTACACCAACAACCAGAAGGCATTCTTCACCGACTTCGCCACCGCAATGATTAAGATGGGGAACATCAAGCCCTTGACTGGCTCACAAGGCATCATTAGAAGGAACTGTAGGAGAGCAAATTAG 756 0.4524 GCDGSVLLDDTSSFKGEKTALPNNNSLRGFEVIDAIKAKVESVCPGVVSCADILAITARDSVQLLGGPNWNVKLGRRDSKTASLAAANSGVIPAPTATLSQLISKFQAVGLSARDMAALSGAHTIGKARCTIYRNRIYNDTNIDRTFANARKKNCPRITGTPKDNNVAPLDFKTPNRFDNSYYSNLLSKKGLLHSDQELFNGGSTDSLVRTYTNNQKAFFTDFATAMIKMGNIKPLTGSQGIIRRNCRRAN 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182594g00003 251 Gene3D Peroxidase, domain 2 93 230 - -
Stsc182594g00003 251 PRINTS Plant peroxidase signature 28 41 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc182594g00003 251 PRINTS Plant peroxidase signature 114 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc182594g00003 251 PRINTS Plant peroxidase signature 66 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc182594g00003 251 PRINTS Plant peroxidase signature 185 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc182594g00003 251 PRINTS Plant peroxidase signature 225 238 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc182594g00003 251 PRINTS Plant peroxidase signature 47 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc182594g00003 251 PRINTS Plant peroxidase signature 169 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc182594g00003 251 CDD secretory_peroxidase 1 249 IPR033905 GO:0004601|GO:0042744
Stsc182594g00003 251 Pfam Peroxidase 1 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc182594g00003 251 ProSitePatterns Peroxidases proximal heme-ligand signature. 115 125 IPR019793 -
Stsc182594g00003 251 PANTHER PEROXIDASE 72-RELATED 1 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc182594g00003 251 FunFam Peroxidase 93 230 - -
Stsc182594g00003 251 SUPERFAMILY Heme-dependent peroxidases 1 251 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc182594g00003 251 PRINTS Haem peroxidase superfamily signature 171 186 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc182594g00003 251 PRINTS Haem peroxidase superfamily signature 48 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc182594g00003 251 PRINTS Haem peroxidase superfamily signature 66 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc182594g00003 251 PRINTS Haem peroxidase superfamily signature 115 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc182594g00003 251 ProSiteProfiles Plant heme peroxidase family profile. 1 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc182594g00003 251 Gene3D - 1 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182594g00003 Stsc-Chr182594 12689 14862 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182594g00003 1 251 Peroxidase AT5G58390 68.526 1.04e-123 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182594g00003 K00430 - tcc:18591067 382.874