Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182593g00001 ATGGCTTTTTTGGGTGAGGTCGATGAGGAGTACATTCCAAAGGCTGGAATGACTTTTACAACACTTGAAGAAGCTGCTGCTTTCTATAAAGAGTATGCTAAACGTGTTGGATTTTCAACTAAGATAAGGAACACGAATAGGTGCAAGGAGACAAAGGAAATAAAGAATCAACTCATTACATGTAACAGAGAGGGGAAATGGATCTCTGAGATACCATATGTTGAGAAGACT 231 0.3896 MAFLGEVDEEYIPKAGMTFTTLEEAAAFYKEYAKRVGFSTKIRNTNRCKETKEIKNQLITCNREGKWISEIPYVEKT 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182593g00001 77 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 6 66 - -
Stsc182593g00001 77 Pfam FAR1 DNA-binding domain 28 66 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182593g00001 Stsc-Chr182593 1090 1486 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc182593g00001 FAR1 6.3e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182593g00001 - K17604 aip:110271906 90.1225