Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182589g00002 ATGCGTAATTTTATTGTGAAGCCAGTTGGAAAAGGTTTGAGGGTTACATCTCACAAATTTAAGTTGAGATTCTTTGTGAGGACTTGCATTAGTAGGGCGTCCCCGGATGATTTCCAATTGTCCCCCTTTCGCTTTACACCATTTCCTGAAATTGATGGCATGTGCTCTAACAACGACATTTTTTTGATAGATGTAGTTGGTCAAGTTGTGGGAAAAGAGGATCCGGAGGACATCATCACCAAAGCAGGACAATCCAGTAAACGAATGAGACTCAATCTGGAGGATGAGGAGAAGAACAAGATGAAGTGTACACTCTTTGGTGATTTCGTGGCTCAAGCCCTCATCAGCTTGCAGAAGGAGAACGTTGAGCCATTAGTCATGGTTGCACAGCTGTTTAAACCCCATGTCTACTTAAGTGATTTCTGCATCCAACCTAGCTTTTATGGATCTCGTGTATTCTTCAATCCAGACTCCCGAAGTGGAACAACTTAG 492 0.4289 MRNFIVKPVGKGLRVTSHKFKLRFFVRTCISRASPDDFQLSPFRFTPFPEIDGMCSNNDIFLIDVVGQVVGKEDPEDIITKAGQSSKRMRLNLEDEEKNKMKCTLFGDFVAQALISLQKENVEPLVMVAQLFKPHVYLSDFCIQPSFYGSRVFFNPDSRSGTT 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182589g00002 163 Gene3D - 37 161 IPR012340 -
Stsc182589g00002 163 SUPERFAMILY Nucleic acid-binding proteins 43 157 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182589g00002 Stsc-Chr182589 4462 5175 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182589g00002 6 157 Core DNA Replication Machinery Family AT2G06510 25.926 2.38e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182589g00002 - - ahf:112718168 173.711