Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182549g00001 ATGCAAACACGTAGCCATAATTACCATTTTGCCCAGCTGCTCTTGTTGTTTCTGTCGTGGTACTCCGCCACGGCGCAAGATCTGGTCCGTTCATCGTGCGCACACGCAAGGTACCCGGCCCTCTGCATCAAAACCCTAACCCCATACGCCACTCCTTCCGCCACCCCCTTGGACCTCGCTCAATCCGCTGTTAGGGTTAGCCTCGCCCGCTCTCGCTCACTCTCCACTTACGTTACCACTCTTCACTCTCAGATGCAGCAACAGCAACAGGAGCGAGTCGCACTCAAAGACTGTGTCGCTCAAATCGCCGACTCCGTAGATGAGTTCACCCGGACGCTTAGCGAGTTGAAGAACATGCAGTTGGGGACCACGTCGTTCCAATGGCACATGAGCAACGCCCGCACGTGGACTAGTACCTCCTTGACCAACTGTTACTCTTGCATCAACGGATTTGGCGGTGTCGACGGCAACGTTGGGTTGGACGTGAAGCGGAGAGTGAACAGCTTAGCAATGTTCACCAGCAACGCGCTTTACCTCATCACCAGAATCGGCGGTGCTGATAATGGCGTTGGTGGAGGCAACAACTGA 588 0.551 MQTRSHNYHFAQLLLLFLSWYSATAQDLVRSSCAHARYPALCIKTLTPYATPSATPLDLAQSAVRVSLARSRSLSTYVTTLHSQMQQQQQERVALKDCVAQIADSVDEFTRTLSELKNMQLGTTSFQWHMSNARTWTSTSLTNCYSCINGFGGVDGNVGLDVKRRVNSLAMFTSNALYLITRIGGADNGVGGGNN 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182549g00001 195 SMART PMEI_2 24 179 IPR006501 GO:0004857
Stsc182549g00001 195 CDD PMEI-like_3 31 183 - -
Stsc182549g00001 195 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 179 - -
Stsc182549g00001 195 Pfam Plant invertase/pectin methylesterase inhibitor 27 178 IPR006501 GO:0004857
Stsc182549g00001 195 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 183 IPR035513 -
Stsc182549g00001 195 NCBIfam pectinesterase inhibitor domain 6 181 IPR006501 GO:0004857
Stsc182549g00001 195 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 183 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182549g00001 Stsc-Chr182549 1453 2125 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182549g00001 29 183 Carbohydrate Esterase AT3G05610 24.375 2.14e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182549g00001 - - aip:107637505 276.174