Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc182521g00001 | ATGGGTTTTCCGGTGGGTTACACGGAGGTTTTCTTCCCTCACCTCTTCCTCCGCCTACTCACCTTCCTCGGCCTCCTCCGCAACCTCATCTTCCACCTCTTCCGCCTCCTCGGACTCTCCGAACTCCTCATCGACACCACCACCGACAACACCACCACCAACCACCACCACCACCTTGTCTCCTCCGATCCCAACCACCCTGCAACAACCCGACCCCCCTCCGCCACACCCTCCCTCTCCGCCATCCTCATCCGCGAGTTCCTCCCCGTCGTAACGTTCCGAGAAATCCTCGTAACTAACAGTAGTGATGACGTGGCAGCATCGCCTCAACTAACTACTGGCAGCTGCGCGGTTTGCCTAACAGAATTAGTTATGGAGGACGAGATCCGGTGGTTACGAAACTGCAAGCACGTGTTTCACAGGGAGTGTGTGGACCGTTGGATTGATCACGATCAGAAGACGTGTCCGCTTTGTAGGACGTCGTTCGTTCCTGATGAAATGGTTGATCAGTATAATCAACGGTTGTGGGCTGCTTCTGGTCTTAGTGAGTTCTACGTAGATTACACTTCTTCTCTCTGA | 579 | 0.544 | MGFPVGYTEVFFPHLFLRLLTFLGLLRNLIFHLFRLLGLSELLIDTTTDNTTTNHHHHLVSSDPNHPATTRPPSATPSLSAILIREFLPVVTFREILVTNSSDDVAASPQLTTGSCAVCLTELVMEDEIRWLRNCKHVFHRECVDRWIDHDQKTCPLCRTSFVPDEMVDQYNQRLWAASGLSEFYVDYTSSL | 192 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc182521g00001 | 192 | ProSiteProfiles | Zinc finger RING-type profile. | 116 | 159 | IPR001841 | - | |
Stsc182521g00001 | 192 | Pfam | Ring finger domain | 115 | 159 | IPR001841 | - | |
Stsc182521g00001 | 192 | SUPERFAMILY | RING/U-box | 94 | 165 | - | - | |
Stsc182521g00001 | 192 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 23 | 179 | - | - | |
Stsc182521g00001 | 192 | SMART | ring_2 | 116 | 158 | IPR001841 | - | |
Stsc182521g00001 | 192 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 94 | 166 | IPR013083 | - | |
Stsc182521g00001 | 192 | MobiDBLite | consensus disorder prediction | 54 | 74 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc182521g00001 | Stsc-Chr182521 | 8998 | 10032 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc182521g00001 | 1 | 191 | C3H Transcription Factor Family | AT1G63840 | 42.784 | 2.39e-44 | 143 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc182521g00001 | K16281 | - | gmx:100500261 | 192.586 |