Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182453g00004 ATGTACCGCAGTAACATAGGCGGAGTTAGTCATTGTTCAAAACATGTGGAAATAATTGATGCTCAGCAGAAAGAACTTGAGAGGATGAAATGCTTCCTTGATGAGCTGAAAATGGAGGTCAAACAAATTCAATCTGAGTGGGAGAAAGAACTGAGCAGGCTAGAGAATCATATTAAGAGTCTTGAAGTGACTTCTACATCTTACCACAAAGTTTTGGAGGAGAATCGAATTCTGTATAACCAAGTACAAGACCTCAAAGGAGCCATAAGGGTCTACTGTAGAGTGAAGCCTTTCTCCCCAGGACAGTCAAATTTACAATCTACAGTGGACTATATAGGAGAAGATGGAAACATAATGATAGTGAATCCTCAAAAGCAAGGGAAAGATGCTAGAAAGGTGTTTTCATTCAATAAGGTGTTTCCAACAAATGTCACACAAGAACAAATTTACGCCGACACTCAACCACTGGTCAGGTCCGTTCTAGATGGCTACAATGTATGCATCTTTGCATATGGACAGACCGGTTCGGGAAAGACCTACACTATGAGTGGCCCTGATCTGATGTCTGAAGAGACATGGGGTGTAAATTATAGGGCTTTGCGCGACTTGTTTCATATATCAAAGGAAAGAGCAGAAGCCATAAATTTAGTTCCAGTTAGTTGTACTCAAGATGTTCTTGATTTGATGAGAATTGGTCAGAAGAATCGCGCTGTAGGTGCTACGGCTCTGAATGAGCGAAGCAGCCGTTCTCACAGTGTGTTGACAGTCCATGTGAGAGGGAAGGATCTAGTTTCAAACTCCATTCTCAAGGGCTGTCTCCATCTTGTGGATTTGGCTGGAAGTGAGAGAGTGGACAAATCTGAGGCCGTCGGCGAAAGACTAAAGGAAGCACAACATATAAACAAATCTCTTTCTGCACTTGGAGATGTTATCTCTGCTTTAGCACAGAAGAGTTCACATATTCCTTACAGAAATAGCAAGCTCACACAAGTGTTACAAGACTCTTTAGGTGGCCATGCAAAAACTTTGATGTTTGTTCATATAAATCCTGAAGTCAATGCTCTAGGGGAGACGATTAGCACGCTAAAATTTGCTGAGAGGGTTGCTTGCATTGAGCTTGGGGCTGCTCAATCTAATAAAGAAACTGGTGAAATCCGAGAGCTAAAGGATGAGATATCAAATATCAAATTGGCATTGGCAAGGAAGGAAACTGAACTTGAACAATGGAAAACTGGGAATGCTAGAAATGCTATCGAATCTCAGAAACCAAGGGCTGTTTCGCCTTATCATTTGCCTAAAAGTGTTACCAGTGGCAGCATTAAGTCTGATAATAGCCAAAGATCCATGGATGATAGAAGCTCTGAGGCTAAAATTAGTTCTTCCGTTAAGCAAACAAGATCAAGACTCCCCTCAAAATTTGTGGACAAGGATTCCATGCCAAAATCACTTCTTCTAACCGAAGAAAAGATAGTAAGCTCATCAGGGAGGGGTCGATCGCCATCTCCTCCAATCAGGAGATCAATATCCACTGATAGAGGCTCTGTCATTAAAAGCAAGGTCAAAAGCGACACAGCAGAAAATCAACCAATACTAAAGAATCAGTTTCCGGCTAGAGTAAACAAATCTCTTGCTATAATGCAAATGGCCCTATCTATAGACAATAACTCAAAGGCGAATGTGAATTCGCAAGAGACATCCAAACAAGACAGCAACAACATTTCTGAAACAATTCTTAACCTTCAAAAGATCAGCTCCAGGAAAGTTCATCAAGAACAGGAAGAGGAACAATTCAAGCAAGTATTTAGTGTACTAAAACAAGGTGTTACCAAGAAAAGCAAGGCTGATAGTAAGTCTAAGGCCAAGCATCATCCTCAACAAATACCCTTTAGGATTCAAAAACCTGATATGGAAACTTCTGGTGAAAAAACTGCAGTTGCACCTCAAAAGAGAGATTATTTTGAGCCAGAAAATGATCTCAGGTTCATGGAGTCTGCAGTCCATGGTATTTTGAATCCGAAAGTTATTCGACAGAACATGTCAAGGAATTTTCAAAACATAGGATCAAGAGGAATGGTGCAAGCAGCTGAGCCTTTATTGACAAGCAAAGTCGAAAACAAACTTATAAATGTTTCTGGCCGCAGCAATACCACAATGCATGAATTTAGAAGGAGCAGATCTACGCCTCGCGGGAAGTTTTTTGCTTCATCTTGA 2211 0.4089 MYRSNIGGVSHCSKHVEIIDAQQKELERMKCFLDELKMEVKQIQSEWEKELSRLENHIKSLEVTSTSYHKVLEENRILYNQVQDLKGAIRVYCRVKPFSPGQSNLQSTVDYIGEDGNIMIVNPQKQGKDARKVFSFNKVFPTNVTQEQIYADTQPLVRSVLDGYNVCIFAYGQTGSGKTYTMSGPDLMSEETWGVNYRALRDLFHISKERAEAINLVPVSCTQDVLDLMRIGQKNRAVGATALNERSSRSHSVLTVHVRGKDLVSNSILKGCLHLVDLAGSERVDKSEAVGERLKEAQHINKSLSALGDVISALAQKSSHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEVNALGETISTLKFAERVACIELGAAQSNKETGEIRELKDEISNIKLALARKETELEQWKTGNARNAIESQKPRAVSPYHLPKSVTSGSIKSDNSQRSMDDRSSEAKISSSVKQTRSRLPSKFVDKDSMPKSLLLTEEKIVSSSGRGRSPSPPIRRSISTDRGSVIKSKVKSDTAENQPILKNQFPARVNKSLAIMQMALSIDNNSKANVNSQETSKQDSNNISETILNLQKISSRKVHQEQEEEQFKQVFSVLKQGVTKKSKADSKSKAKHHPQQIPFRIQKPDMETSGEKTAVAPQKRDYFEPENDLRFMESAVHGILNPKVIRQNMSRNFQNIGSRGMVQAAEPLLTSKVENKLINVSGRSNTTMHEFRRSRSTPRGKFFASS 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182453g00004 736 Pfam Microtubule binding 74 211 IPR031852 GO:0008017
Stsc182453g00004 736 PANTHER KINESIN-LIKE PROTEIN KLP-3 14 477 IPR027640 GO:0003777|GO:0007018
Stsc182453g00004 736 SMART kinesin_4 86 379 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc182453g00004 736 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 408 IPR027417 -
Stsc182453g00004 736 Pfam Kinesin motor domain 215 369 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc182453g00004 736 Gene3D Kinesin motor domain 30 213 IPR036961 -
Stsc182453g00004 736 MobiDBLite consensus disorder prediction 487 514 - -
Stsc182453g00004 736 ProSiteProfiles Kinesin motor domain profile. 88 371 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc182453g00004 736 FunFam Kinesin-related protein3 211 413 - -
Stsc182453g00004 736 Coils Coil 385 405 - -
Stsc182453g00004 736 PRINTS Kinesin heavy chain signature 241 258 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc182453g00004 736 PRINTS Kinesin heavy chain signature 272 290 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc182453g00004 736 PRINTS Kinesin heavy chain signature 163 184 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc182453g00004 736 PRINTS Kinesin heavy chain signature 321 342 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc182453g00004 736 Gene3D Kinesin motor domain 214 413 IPR036961 -
Stsc182453g00004 736 Coils Coil 19 64 - -
Stsc182453g00004 736 MobiDBLite consensus disorder prediction 414 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182453g00004 Stsc-Chr182453 14943 18405 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182453g00004 79 371 Calmodulin-binding Proteins AT5G65930 40.816 7.25e-69 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182453g00004 K10406 - gmx:100811516 1046.96