Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182447g00001 ATGTCGGAATCGGAGGTTGTTTGCGTCACCGGAGGAAGCGGTTGCATTGGATCCTGGCTTGTGCACCTCCTCCTCACTCGCGGCTACACCGTTCAAGCCACCGTTGAAGATCTCAAGGATGATGCTGAGACGAAGCATCTAGAAGCTCTCGAAGGAGCGTCCACGCGTCTCCGTCTCTTCCAAATCGACCTTCTCCAGTATGACACCATCGCCGCCGCCGTGCGCGGCTGCTCCGGCGTCTTCCACCTCGCTTCACCCTGCATTGTCGACGAAGTCCATAACCCACAGAAGGAGCTTCTGGACCCTGCCATTAGAGGGACAATGAATGTCCTTGAGGCGGCAAAGGAAGCAGGGGTGAAGCGTGTCGTGGTAACGTCGTCTATCTCGGCGATTACCCCGAGCCCCGGTTGGCCATCGGATGTTGTCAAGACAGAGGATTGTTGGACTGACATTGAATACTGCAAGCAAAAGGGGTTGTGGTATCCGCTATCCAAGACTTTAGCAGAGAAAGCTGCTTGGGACTTTGCAAAGGAGAAAGGCTTGGATGTTGTGGTAGTGAATCCTGGAACTGTGATGGGCCCTGTTATTTCGCCCAGACTTAATGCTAGCATGATCATGCTTGTTCGCCTTCTTGAAGGGTGTGACGAAACGTACGAGAACTTTTTTATGGGATCAGTCCACTTTAAAGATGTAGCCTTAGCACATATTATGGTGTATGAGAACAAAACAGCAACGGGTAGGCATATGTGTGTAGAAGCTATCTCTCACTATGGTGACTTCGTGGCGAAAGTTGCGGAGCTTTATCCACAATATAACGTGCCTAAGATCCCAAGAGATACGCAATCGGGATTGTTGAGAGCAAAGGATGGATCCAAGAAACTTATGGATCTGGGTTTGGAATTTATTCCCATGGAGAAAATTATCAAGGATGCTGTAGAGTGTTTGAAGAGCANNNNNNNNNNGTTGCTGCTTCTGTTATTTGAAACTTAA 990 0.4889 MSESEVVCVTGGSGCIGSWLVHLLLTRGYTVQATVEDLKDDAETKHLEALEGASTRLRLFQIDLLQYDTIAAAVRGCSGVFHLASPCIVDEVHNPQKELLDPAIRGTMNVLEAAKEAGVKRVVVTSSISAITPSPGWPSDVVKTEDCWTDIEYCKQKGLWYPLSKTLAEKAAWDFAKEKGLDVVVVNPGTVMGPVISPRLNASMIMLVRLLEGCDETYENFFMGSVHFKDVALAHIMVYENKTATGRHMCVEAISHYGDFVAKVAELYPQYNVPKIPRDTQSGLLRAKDGSKKLMDLGLEFIPMEKIIKDAVECLKSXXXXLLLLLFET 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182447g00001 329 Gene3D - 1 323 - -
Stsc182447g00001 329 FunFam Cinnamoyl-CoA reductase 1 1 323 - -
Stsc182447g00001 329 Pfam NAD dependent epimerase/dehydratase family 7 247 IPR001509 -
Stsc182447g00001 329 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 312 - -
Stsc182447g00001 329 CDD FR_SDR_e 7 299 - -
Stsc182447g00001 329 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 315 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182447g00001 Stsc-Chr182447 2641 5462 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182447g00001 3 317 Monolignol Biosynthesis Gene Families AT5G58490 78.095 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182447g00001 - - adu:107458329 619.002