Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc182427g00002 | ATGTTTGCAGTTCAAAAAAGCAGCACAGAAGAGAGCAGTCATCAGAAGAATGAGAAGAACAGCATGAATATGAATGGTAATAATAATGGAAGCTTTGTGAAGGTAAGCATGGATGGTGCACCCTACCTTCGCAAAGTGGATTTGAAGATGTACAACAGTTACCCTCAGCTCTCTGATGCCTTAGCTAAAATGTTTAGCTCTTTCACCATTGGAAGTTGTGAATCAGAAGGAATGAAGGATTTCTTTATGAATGAGAGAGCTTTGATGGATGTATTGAACAGTTCTGATTATGTCCCAACTTATGAAGATAAGGATGGCGATTGGATGCTTGTCGGTGATGTTCCTTGGGAGATGTTTGTTGAATCATGCAAGCGTTTACGTATCATGAAAGGAAAAGAAGCAATTGGACTGGCACCTAGAGCCATGGAGAAATGCAAGAACAGAAGCTAG | 450 | 0.4044 | MFAVQKSSTEESSHQKNEKNSMNMNGNNNGSFVKVSMDGAPYLRKVDLKMYNSYPQLSDALAKMFSSFTIGSCESEGMKDFFMNERALMDVLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNRS | 149 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc182427g00002 | 149 | Gene3D | - | 24 | 143 | - | - | |
Stsc182427g00002 | 149 | PANTHER | AUXIN-RESPONSIVE PROTEIN IAA17 | 16 | 136 | IPR003311 | GO:0005634|GO:0006355 | |
Stsc182427g00002 | 149 | Pfam | AUX/IAA family | 11 | 140 | IPR033389 | - | |
Stsc182427g00002 | 149 | ProSiteProfiles | PB1 domain profile. | 30 | 131 | IPR000270 | GO:0005515 | |
Stsc182427g00002 | 149 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Stsc182427g00002 | 149 | FunFam | Auxin-responsive protein | 25 | 141 | - | - | |
Stsc182427g00002 | 149 | SUPERFAMILY | CAD & PB1 domains | 21 | 130 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc182427g00002 | Stsc-Chr182427 | 14459 | 16776 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc182427g00002 | 1 | 129 | B3 DNA Binding Superfamily | AT5G37020 | 30.233 | 3.32e-08 | 49.7 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | AUX/IAA | Stsc182427g00002 | AUX_IAA | 1.2e-64 | CL0072 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc182427g00002 | K14484 | - | gmx:100803065 | 230.72 |