Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182424g00001 ATGCCAATTGGAAACACCGATCCCTCAGACAAAGAACTATTTCTTGAAGTTGATCCAACTGGAAGATATGGAAGATACAGTGATAAACTTGGAACTGGAACTGTTGCTGCCAAAATTGTGTACAGAGCATTTGATAGAGAAGAAGGAACAGAAGTGGCTTGGAACCAAGTGAAGCTTAGAAACTTCACTGATGATGATGTTGATGATGATCCTTCCATGGTGGATAGGCTTTACTCTGAACTCAGATTGCTCAAAACCATTTCCAACAAACACATCATTTCGCTTTTTGCCTTCTGGAATGATGACGTCACTCACACTTTGAATTTCATCACTGAAGTATGCAGCAGTGGCAGTCTGAGGGAGTACAGGAAGAGGCACAAGCATGTTTCCATGAAGGCTATCAAGAAATGGTGTAAGCAGATTCTACAAGGTTTGGATTATTTGCACAACCATCATCCCTGCATCATCCACAGAGACCTCAACTGCGGCAATGTCTTTATCAATGGAAATACTGGCCAGGTTAAGATTGGTGACTTGAGTTTGGCAATAATTGTGGGAAGGAGCCACTCTGCGCATTCGGTTCTCGGGACACCGGAATTCATGGCGCCGGAGTTATATGAGGAGAAGTACACGGAAACGGTGGACATATACTCATTTGGAATGTGTGTGTTAGAAATGGTGACATTAGAGATTCCATACAGTGAGTGTGACAATGTTGTGAAGGTGTACAAGAAAGTGTGTTCCGGTGTGAGGCCTCAGTCACTCAACAAGATTAAGGATGCAGAGGTGAAGGGGTTTATTGAGAGGTGCATTGCTAAGCCGAGGGCAAGACCTTCTGCTGCACAGCTTCTTAAGGACCCTTTCTTTCAGGAGCTTAATTGTGAAGATAAT 891 0.4355 MPIGNTDPSDKELFLEVDPTGRYGRYSDKLGTGTVAAKIVYRAFDREEGTEVAWNQVKLRNFTDDDVDDDPSMVDRLYSELRLLKTISNKHIISLFAFWNDDVTHTLNFITEVCSSGSLREYRKRHKHVSMKAIKKWCKQILQGLDYLHNHHPCIIHRDLNCGNVFINGNTGQVKIGDLSLAIIVGRSHSAHSVLGTPEFMAPELYEEKYTETVDIYSFGMCVLEMVTLEIPYSECDNVVKVYKKVCSGVRPQSLNKIKDAEVKGFIERCIAKPRARPSAAQLLKDPFFQELNCEDN 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182424g00001 297 Gene3D Phosphorylase Kinase; domain 1 9 112 - -
Stsc182424g00001 297 FunFam probable serine/threonine-protein kinase WNK9 114 294 - -
Stsc182424g00001 297 FunFam Probable serine/threonine-protein kinase WNK1 9 112 - -
Stsc182424g00001 297 SUPERFAMILY Protein kinase-like (PK-like) 18 290 IPR011009 -
Stsc182424g00001 297 Gene3D Transferase(Phosphotransferase) domain 1 114 294 - -
Stsc182424g00001 297 ProSiteProfiles Protein kinase domain profile. 24 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc182424g00001 297 Pfam Protein kinase domain 28 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc182424g00001 297 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182424g00001 Stsc-Chr182424 12595 14692 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182424g00001 10 289 MAP Kinase Kinase Kinase AT5G55560 70.357 1.94e-154 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Stsc182424g00001 Pkinase 2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182424g00001 K08867 - jre:108994268 459.914