Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182410g00001 ATGGCTTTGCATTCCCACATAGAGAGAGTCCTATGGAGCGAGGAGCAAATCTCTCGCCGGGTCACTGACCTCGCCGCCCAAATCTCCGCCGACTTTCGCGACGTTTCTCCGCCGCCAGTGGTGGTTGGAGTGGCCACGGGCGCTTTCCTGTTCCTGGCCGACCTGGTTCGAAGGATTGAGCTCCCCGTGGCCGTTGATCTGGTCAGAGCCGAATCCTACGGTTCAGGAACACAGTCCAACTGTG 244 0.5943 MALHSHIERVLWSEEQISRRVTDLAAQISADFRDVSPPPVVVGVATGAFLFLADLVRRIELPVAVDLVRAESYGSGTQSNC 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182410g00001 81 Pfam Phosphoribosyl transferase domain 16 77 IPR000836 -
Stsc182410g00001 81 PANTHER HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE 4 78 - -
Stsc182410g00001 81 Gene3D - 1 81 IPR029057 -
Stsc182410g00001 81 SUPERFAMILY PRTase-like 3 79 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182410g00001 Stsc-Chr182410 1 299 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182410g00001 1 80 PRT Gene Family AT1G71750 61.728 2.17e-29 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182410g00001 K00760 - qsa:O6P43_004139 120.553