Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182398g00001 ATGTCGTCGAAATGCAGCAAGATTCGCCACATTGTGAGGCTTCGTCAGATGCTGCGTCGCTGGCGCATCAAGGCACGCATGTCTTCAGCTGCTAACCGCTCAACCTCTTCTCCACCGTCCGATGTTCCCGCTGGACACGTGGCAGTATGTGTGGGCGTCAACTGCACCAGATTCGTTGTGCGCGCTACTCACCTTAACCACCCTGTCTTCCAGAAGCTTCTGGTTCAGGCGGAAGAAGAGTACGGCTTCGCCAACCACGGTCCTTTAGCCATTCCCTGCGACGAAGCACTCTTTGAAGATGTTATCCGGTTTATCTCCCGGTCTGAGTCTGGATCCGGTTCGAACCGGTTCTTGAATCTTGATGATTCTCAGAGGCACTGCCACGTGGGTCTCAGGAACAACCTTGAATTCTGGAAGCAGGAATCTCGACCGTTGCTCCATGGCTTCAATGACAAGACCATTTGGTAG 468 0.5342 MSSKCSKIRHIVRLRQMLRRWRIKARMSSAANRSTSSPPSDVPAGHVAVCVGVNCTRFVVRATHLNHPVFQKLLVQAEEEYGFANHGPLAIPCDEALFEDVIRFISRSESGSGSNRFLNLDDSQRHCHVGLRNNLEFWKQESRPLLHGFNDKTIW 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182398g00001 155 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 101 IPR003676 GO:0009733
Stsc182398g00001 155 Pfam Auxin responsive protein 13 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182398g00001 Stsc-Chr182398 3103 3570 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182398g00001 4 154 Calmodulin-binding Proteins AT4G34750 55.128 3.20e-51 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182398g00001 K14488 - qsu:112012848 238.424