Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182363g00001 ATGAAAGTGGAAGGAGGAAGGAACGCGTTGACGGTGACCAGGAGCGATGGCGACGCGAGCATCAGGCAGCAGCGACAGCACGGCTACAATGACGATGATAGAATGGACGCGAGCACAGCGACAACAACTCCCTCTATGGATTCGAGGGGTGGTGCTTCGATTCGTAGGGCTATGATGGCGAGTATTGGGATGAGAGGGATGACGATGGTGAGGGGGTGGTTCGTGCATATGGATCCTGTGAATATCGTGTCTGTGAATGAAGAGGTTGAAAATGAAGAAACTTCAACCGTTGATGCATGGAAAATCCCAAATGCAAGTATGGTTTTTAATTCAGAAGAGGAACTTTGTAATTATTATCGAAAATATGCCTTCAATATAGGTTTTGAGGTTAGAAAAAATAGTACCAGAAATGATAGTGGAAAAAAATATTACTCACTTGGATGTGCTAAAGGAGGTAAGAATGTTCCCAAGAAAGAATCCATTGTGAGGAGATTGTTAAGCAAAACTAATTGTAAGGCAAAAATTACCGTGGTTGTTTAA 540 0.4296 MKVEGGRNALTVTRSDGDASIRQQRQHGYNDDDRMDASTATTTPSMDSRGGASIRRAMMASIGMRGMTMVRGWFVHMDPVNIVSVNEEVENEETSTVDAWKIPNASMVFNSEEELCNYYRKYAFNIGFEVRKNSTRNDSGKKYYSLGCAKGGKNVPKKESIVRRLLSKTNCKAKITVVV 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182363g00001 179 MobiDBLite consensus disorder prediction 1 52 - -
Stsc182363g00001 179 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 83 177 - -
Stsc182363g00001 179 MobiDBLite consensus disorder prediction 35 49 - -
Stsc182363g00001 179 Pfam FAR1 DNA-binding domain 117 177 IPR004330 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc182363g00001 FAR1 7.3e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182363g00001 - K01807 ecad:122587955 87.0409