Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182358g00002 ATGGGTCATGCCTTCAATCTAGGCAATGGGAGTTCTATGCCGATGCACCAAATTTATGGCTTGTCAATGAGTGAGCCTTTTAACAGGACAGATTTCATATCCATGGATCAGTCATACCAAAAGGTTGACAGCAATTTGATATCTCTGGGAAGCTCATCATATCCAAAGGGGCATGAGAACTTCATACCAATGGGTGCAATTTACAGTAAATCAGCAGAAGATTTCATGAATATTAGTCCTTTCTATGGCAAAGGCATTGATCATATGTTATCCTTGGGTCCAACAGGAAATTCTAGCTCTTCACTGGCTGCTCATGCCTACAATAACGGCGAAAGCGGTTCCATGCCCTTTGTTGCTCTTACTGGTAATCCTGAACCCGAACCCAATCCCTCTGTTGGAATCATGAATGGCTATAATCTATTGATGGAGAACCAGAATTTATTAGCTCAAGGTCTTGATAGCCAGAATAAGGATCAGATTAGTCCAGATGCCGAACAACAAGCTGTAAAAACCACTCAAACAACTGGTACTCAAACTGATACTACTAAACAGAAGAAGAACAAAGAGAAGAAAACCAGGAAGGCTTCATCTAACAACTTCCCTTCAAATGTCAAAAGTTTGCTGTCAACTGGTATTTTTGATGGTGTCCCTGTGAAGTATGTTTCGTGGTCGCGCGAGAAAACCCTGGGAGCAGTGATAAAAGGAACTGGGTATGTGTGTTCATGTGATGAATGCAAGGAACCAAAGCCTCTAAATGCATATGAGTTTGAGCGCCATGCTGGTTCCAAGACCAAACATCCTAACAACCACATATACTTTGAGAACGGAAAAACCGTCTATGGTGTGGTTCAAGAGCTGAAAAACACTCCACAGGAGATGCTCTTTGATGTAATTCAAAATGCCACTGGCTCCACTGTCAACCAGAAGAACTTTCAGAGTTGGAAAGCATCATATCAAGCTGCTGCAAAAGAGCTTCAGCGTATATATCGAGCAAATGAAGTGACCACTCTATAA 1014 0.4191 MGHAFNLGNGSSMPMHQIYGLSMSEPFNRTDFISMDQSYQKVDSNLISLGSSSYPKGHENFIPMGAIYSKSAEDFMNISPFYGKGIDHMLSLGPTGNSSSSLAAHAYNNGESGSMPFVALTGNPEPEPNPSVGIMNGYNLLMENQNLLAQGLDSQNKDQISPDAEQQAVKTTQTTGTQTDTTKQKKNKEKKTRKASSNNFPSNVKSLLSTGIFDGVPVKYVSWSREKTLGAVIKGTGYVCSCDECKEPKPLNAYEFERHAGSKTKHPNNHIYFENGKTVYGVVQELKNTPQEMLFDVIQNATGSTVNQKNFQSWKASYQAAAKELQRIYRANEVTTL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182358g00002 337 PANTHER AUTOIMMUNE REGULATOR 156 318 - -
Stsc182358g00002 337 MobiDBLite consensus disorder prediction 156 202 - -
Stsc182358g00002 337 MobiDBLite consensus disorder prediction 156 181 - -
Stsc182358g00002 337 Pfam Tify domain binding domain 232 286 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182358g00002 Stsc-Chr182358 7126 8749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182358g00002 190 319 PHD Transcription Factor Family AT3G53680 53.846 1.44e-41 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182358g00002 - - adu:107486410 424.861