Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182344g00002 ATGGGAAATTACAGGTTCAAATTATCAGATATGATCCCAAATGCTTGGTTCTACAAGCTTAGAGACATGAACAAATCATCATCAAGAAAGCACAAATCACCAACTCCTCCTCCTCCTCATCATCATCAATCTTCAACAACAACCTCAAATTCATCAAAACCAAAGCAGCAATTCATCAACACCACTCCAAGAAAGTCCTATTACTTCACAAGAGAGCACATTTCACACACCACTTCCCCAAGAAAATCATCATCAAAACACAGACCACCAATAAGGTTTAGTAATAGCAGAAGAACTACAGCAACTACTCCAAAACCTTCTTCAGAGTTCAAAGCAGCAGAGCCAGAATTCAGAACAGACCGTGTTCTTCACACTGACTCTAATTCTAATTCCAAGTCTTCATCCATGGATGACATCATCATTGACGTGGACAACAACTCCATCTCCACAACAAAATCTGACATTAACAACAACAACAACAACAAACATCTTCTTCTTCCACCAATTCTCACCAAACCAAGGAACAAGAACAAGAACTCTACCACCACCACTCCATGTTCTAGAAGATTCTCTGTTAGCTCAGCTGCAGGGCTGAGGAGGCTTCGAATCAATTCGCCGAGAGTTTCCGGAGAATGTTTCCGAAAACTCGATCAGGCGAACGCACCAGTCAGCAGCGGCCGAAGAAGAATAACTGCTGCTTCTTCGGCCGCTGCTGGTACTACTGGTGCGTCCGCTCGAAAGAAGAAGCTTCCGGATAGCTTTGCGATAGTAAAATCATCGTTGAATCCGCAAAGAGATTTCAGAGAATCAATGGTGGAAATGATTGTGGAGAACAACATAAGGAGTTCGAAGGAATTGGAGGATCTTCTTGCTTGTTACCTAACTCTGAATTCAGATGAGTATCATGGCTTAATCATCAATGTCTTCAAGCAAATTTGGTTTGATTTAACTGATAATAATAGCAATAACAGTAACATGTATCAACAACAAGAATAA 996 0.4106 MGNYRFKLSDMIPNAWFYKLRDMNKSSSRKHKSPTPPPPHHHQSSTTTSNSSKPKQQFINTTPRKSYYFTREHISHTTSPRKSSSKHRPPIRFSNSRRTTATTPKPSSEFKAAEPEFRTDRVLHTDSNSNSKSSSMDDIIIDVDNNSISTTKSDINNNNNNKHLLLPPILTKPRNKNKNSTTTTPCSRRFSVSSAAGLRRLRINSPRVSGECFRKLDQANAPVSSGRRRITAASSAAAGTTGASARKKKLPDSFAIVKSSLNPQRDFRESMVEMIVENNIRSSKELEDLLACYLTLNSDEYHGLIINVFKQIWFDLTDNNSNNSNMYQQQE 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182344g00002 331 MobiDBLite consensus disorder prediction 152 187 - -
Stsc182344g00002 331 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 96 319 IPR038933 GO:0045892
Stsc182344g00002 331 MobiDBLite consensus disorder prediction 26 135 - -
Stsc182344g00002 331 NCBIfam uncharacterized plant-specific domain TIGR01568 255 317 IPR006458 -
Stsc182344g00002 331 Pfam Transcriptional repressor, ovate 260 316 IPR006458 -
Stsc182344g00002 331 MobiDBLite consensus disorder prediction 111 125 - -
Stsc182344g00002 331 MobiDBLite consensus disorder prediction 224 244 - -
Stsc182344g00002 331 MobiDBLite consensus disorder prediction 42 68 - -
Stsc182344g00002 331 MobiDBLite consensus disorder prediction 173 187 - -
Stsc182344g00002 331 Pfam DNA-binding domain 1 53 IPR025830 GO:0003677
Stsc182344g00002 331 ProSiteProfiles OVATE domain profile. 256 315 IPR006458 -
Stsc182344g00002 331 MobiDBLite consensus disorder prediction 224 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182344g00002 Stsc-Chr182344 16481 17604 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc182344g00002 Ovate 3.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182344g00002 - - adu:107485240 347.821