Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182334g00005 ATGGAGAAGAAGGTTCGTCAGCTCCAAGAATCATTGACAAGGCTAGAAGAGAAGATTGCTAACGTAGAATCAGAGAACCAGGTTCTACGTCAACAAGCTGTCTTGATGGCACCTAATAAGTTCCTCCACAGACGCCAGAGCTCACTTGCCCAGAGAGAGAGGGCTTCTGAAAGTGCTCATAATAGTATTGCAGTGGAGGGGAAACCACATGTGACTAATCAGGAACTGCAAACTAGCCCATCAATGAATCAAAGGGAATCTTCTGAAGTGGATGATAAACCACAGAAATCACTAAACGAGAAACAACAAGAGAATCAAGAATTACTAATTAGATGCATTGCACAACATCTAGGATTTGCTGGAAATAGACCCATTGCTGCTTGTATCATATACAAGTGCCTCTTGCATTGGAGATCATTTGAAGTTGAGCGCACTAGCGTTTTTGATAGAATCATCCAGACTATTGGCCATGCAATTGAGACCCAGGATAACAATGATGTCTTAGCTTACTGGTTATCCAATGCCTCCACGCTTCTCTTGTTACTCCAGCGCACACTCAAAGCAAGTGGTGCTGCTGGAATGGCTCCACAACGCCGTCGTTCTCAATCAGCAACCCTGTTTGGGAGGATGACTCAAAGTTTCCGTGGAAGTCCAGCAGGAGTCAATCTGTCCTTAATTAATGGTAGTTCAAGTAGAGGAGTAGATACATGTAGACAAGTTGAAGCCAAGTACCCAGCTTTGCTTTTCAAACAGCAGCTTACAGCATATGTGGAAAAGATATATGGAATGATTCGTGATAACTTGAAGAAAGAAATTTCTCCCTTGCTTGGATTGTGCATTCAGGCACCAAGAACATCTAGAGCAAGCTTGGTTAAGGGATCGTCACGTTCTGTTGCAAACACTGAAGCCCAGAAAGCTTTGATCGCTCACTGGCAGGGGATAGTTAAGAGCCTAGGGAACTTTTTAAATACATTGAAAGCAAATCATGTTCCGCCATTTTTGGTTCGTAAGGTGTTCACCCAAATTTTCTCTTTCATCAATGTACAATTGTTCAATAGTCTTCTTCTTAGACGAGAGTGTTGCTCATTTAGTAATGGAGAATATGTTAAAGCTGGTTTGGCTGAACTAGAGCATTGGTGTTATAAGGCAACAGATGAGTATGCAGGTTCAGCCTGGGACGAGCTTAAACATATTAGACAAGCCATTGGATTTCTGGTTATACATCAAAAACCAAAGAAAACACTGGATGAAATAAGTCATGACCTGTGCCCATTCCCTATTTACAGGTCCTCAGTATACAGCAGTTATATCGGATTAGCACCATGTATTGGGATGACAAATATGGCACGCATAGTGTGTCACCTGAAGTCATATCCAATATGA 1383 0.4208 MEKKVRQLQESLTRLEEKIANVESENQVLRQQAVLMAPNKFLHRRQSSLAQRERASESAHNSIAVEGKPHVTNQELQTSPSMNQRESSEVDDKPQKSLNEKQQENQELLIRCIAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQDNNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSQSATLFGRMTQSFRGSPAGVNLSLINGSSSRGVDTCRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQKALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPFPIYRSSVYSSYIGLAPCIGMTNMARIVCHLKSYPI 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182334g00005 460 CDD MyosinXI_CBD 100 424 IPR037975 GO:0007015
Stsc182334g00005 460 ProSiteProfiles Dilute domain profile. 149 460 IPR002710 -
Stsc182334g00005 460 SMART DIL_2 337 434 IPR002710 -
Stsc182334g00005 460 Pfam DIL domain 338 424 IPR002710 -
Stsc182334g00005 460 Coils Coil 5 32 - -
Stsc182334g00005 460 PANTHER DILUTE DOMAIN-CONTAINING PROTEIN YPR089W 49 423 - -
Stsc182334g00005 460 MobiDBLite consensus disorder prediction 45 101 - -
Stsc182334g00005 460 MobiDBLite consensus disorder prediction 67 85 - -
Stsc182334g00005 460 MobiDBLite consensus disorder prediction 86 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182334g00005 Stsc-Chr182334 15952 20136 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182334g00005 2 424 Myosins gene family AT1G54560 83.688 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182334g00005 K10357 - gmx:100816792 726.857