Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc182301g00002 | ATGGCTTCTTCTTCAACTTCAACGTGGGTTAGAGGCAAGTGCTTGGGAAAGGGCGCCTTTGGTACCGTTAACGTGGCGGTTACAAAATCTGACGGTTACGTTTTCGCGGTTAAGTCCGTGGATCTTAAAACGGCTCAAGCAGGTCAGATTGAAGCTCTGGAGAACGAGATTAGGATCCTCAGGCTTCTACCTCCGAGTCCTCACGTGATCACTTTCCTTGGCGATGATGTCACGTGCGAGAGGACCAACGGAGCCTCGTCCTTTAGGAACCTGCACTTGGAGTACATGCCACGTGGCACCGTCGCTGATTTAGACCCTGCTGACGTGGACGAACGGTTGGTTCGCCGTTACGCTTCCTGCTTGGTTCACGCGCTTCGCCACCTCCACGCGCTTGGCGTTGTTCACTGCGACGTTAAGGGAAGGAACGTGCTGCTTTCCAACGACGGCGGGGCGGTGAAGCTCGCAGATTTTGGATCCGCTGTGGAGTTTTCCGGCGAGAGTTGCGTTGGTTCGAGGGGGAGTCCGATGTGGATGGCGCCGGAGGTTGTTCGCCGGGAGTATCAGGGGCCGGAGTCTGACGTGTGGTCGTTGGGGTGCACGGTGATTGAGATGATCACCGGAAAACCACCGTGGGAGGATCACGGCGCTGACACGCTGAGTCGGATCGGGTATTCTAGCGAGTTACCTCTGTTTCCGACTCGGTTATCGGAATTCGGTCGGGACTTCCTCGAGAAGTGTCTGAGAAGGGAGAAGAGTGAGAGGTGGAGCTGCGATCAGCTGCTGCAGCATCCATTTTTGATCAGTGAGGGTTTAATTAAGGCTTTGGAATCGTCGCCTCGGTGCGTTTTGGACTGGGTTGACTCGGGTTTCGACTCGGAGGAAGAAGAAGGCGAGATGAACTTGGAAGGTGAAAGTGTGAGTTCGGCGAAGGGTAGAATTGGTAAATTGGCTGCGGGAATGGGGGCAAATTGGGAAACAGAGGGATGGGTAGTGGTGAGAGCATTGGCATCTGAGTCTGACGAAGAAGCAACGATAATAACAGAAGCAACAGGAAACTGTGAAGAAAGGGCCGTTTCGGAATTTGGAAATGAGGTGGCGAGGGTAGAATCGGGAATCAAGGTGGATGCTCATGCTCATGTGGAATATTCGGCTTTTTGTGGAAGGAAAGGAGAGAAAGTTGGAAGGGTAAAATGGGGAAAGCGAAAAAACAAAAGGTTGGTGTGGCGGCGGTGGAAGCTCCACCGTCAGGGAGGTGGTGGTTGTGGTGATGATAAGTGGGAAGATGAGTTGGATAGGAATGGGAGACATGAGGATATTGTCCATTTGTCCTCAAGATCCTAA | 1341 | 0.5295 | MASSSTSTWVRGKCLGKGAFGTVNVAVTKSDGYVFAVKSVDLKTAQAGQIEALENEIRILRLLPPSPHVITFLGDDVTCERTNGASSFRNLHLEYMPRGTVADLDPADVDERLVRRYASCLVHALRHLHALGVVHCDVKGRNVLLSNDGGAVKLADFGSAVEFSGESCVGSRGSPMWMAPEVVRREYQGPESDVWSLGCTVIEMITGKPPWEDHGADTLSRIGYSSELPLFPTRLSEFGRDFLEKCLRREKSERWSCDQLLQHPFLISEGLIKALESSPRCVLDWVDSGFDSEEEEGEMNLEGESVSSAKGRIGKLAAGMGANWETEGWVVVRALASESDEEATIITEATGNCEERAVSEFGNEVARVESGIKVDAHAHVEYSAFCGRKGEKVGRVKWGKRKNKRLVWRRWKLHRQGGGGCGDDKWEDELDRNGRHEDIVHLSSRS | 446 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc182301g00002 | 446 | CDD | STKc_MAPKKK | 9 | 266 | - | - | |
Stsc182301g00002 | 446 | Gene3D | Transferase(Phosphotransferase) domain 1 | 3 | 306 | - | - | |
Stsc182301g00002 | 446 | Pfam | Protein kinase domain | 11 | 266 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc182301g00002 | 446 | PANTHER | CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED | 7 | 344 | - | - | |
Stsc182301g00002 | 446 | FunFam | Serine threonine protein kinase putative | 7 | 317 | - | - | |
Stsc182301g00002 | 446 | SUPERFAMILY | Protein kinase-like (PK-like) | 7 | 275 | IPR011009 | - | |
Stsc182301g00002 | 446 | ProSiteProfiles | Protein kinase domain profile. | 9 | 266 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc182301g00002 | 446 | ProSitePatterns | Protein kinases ATP-binding region signature. | 15 | 38 | IPR017441 | GO:0005524 | |
Stsc182301g00002 | 446 | SMART | serkin_6 | 9 | 266 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc182301g00002 | 446 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 133 | 145 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc182301g00002 | Stsc-Chr182301 | 7701 | 9803 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc182301g00002 | 9 | 347 | MAP Kinase Kinase Kinase | AT2G30040 | 60.117 | 4.59e-136 | 397 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | STE_STE11 | Stsc182301g00002 | Pkinase | 3e-54 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc182301g00002 | - | - | tpra:123921217 | 449.899 |