Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182257g00003 ATGGCTGATGCGAATGCCGCCTTGTTCGCCACCTTCCTCGAAGACTGGATGCTTCGCCAGAGAACCTACCTCCGAGAGCTTCGTTCTGCGCAGCAAAACCGTCAAGAACTTGGAGATTCCGATAAGAGGGAACTCATAAACAGAGTACTCTGCCACTACGAACAATACTACCAGGAGAAATCAAGAATCGCGCAACGCGATATCTTCTTGGTGTTCTCGCCGCCGTGGTTCAGTTCCTTGGAGAGGACGTTCCTTTGGATCGCTGGATTCAAGCCGGCGAAAGCGTTTCACCTCGTAAACCAGGCGGTGCGCGACTTGAGCGACGAACAACGCCACATGCTGAGCCAGCTCAGCATGGCTACGAGGATGAAGGAGAAAGAGCTCAACGACGAGCTCGCCAAGACTCACGAGAGCCTCGCGAACTCGCCGCTGATCGAGACGGCGAGAAGCCGTGGCAGGGCGTGTCTGGACCGCGCGAGGCAGTTGCGGTCCAGGCACACCTGGGAAATTGTGATTGAAAGGGAAGAGGAAGGTGGAGTACCAAGCGAGCTGCAGGTGACAATGGAGAGCGTTGTGGCGAGTGCGGATGAACTGAGGACGAATACGGCATTGGGTGTACTGCAGATATTGAGGGCGGATCAGGCAGTTACTTTCTTGGCAGATGTTGCTGAGCTTCAGCTCAAGATCAGGACTAAGGAGTTGTTGGCAAATGATGAGGAAGATGAGGGCATGCATGTGCATGCTTTGGCTTCAAGCTAA 759 0.5428 MADANAALFATFLEDWMLRQRTYLRELRSAQQNRQELGDSDKRELINRVLCHYEQYYQEKSRIAQRDIFLVFSPPWFSSLERTFLWIAGFKPAKAFHLVNQAVRDLSDEQRHMLSQLSMATRMKEKELNDELAKTHESLANSPLIETARSRGRACLDRARQLRSRHTWEIVIEREEEGGVPSELQVTMESVVASADELRTNTALGVLQILRADQAVTFLADVAELQLKIRTKELLANDEEDEGMHVHALASS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182257g00003 252 ProSiteProfiles DOG1 domain profile. 6 239 IPR025422 GO:0006351|GO:0043565
Stsc182257g00003 252 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 9 231 - -
Stsc182257g00003 252 Pfam Seed dormancy control 24 100 IPR025422 GO:0006351|GO:0043565
Stsc182257g00003 252 Coils Coil 222 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182257g00003 Stsc-Chr182257 7714 8848 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182257g00003 3 146 Calmodulin-binding Proteins AT1G77920 30.556 1.47e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182257g00003 - - adu:107484978 340.502