Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182249g00001 ATGGAGAAAGAGAGAGTCTTGGAGACTCTACAAATCATAGTTTCTGGGGAAGCGGAGTTCATTGACTATATAATGGAGAAAGATAGAGTCTTGGAGACTCTACAAACAGGGGACATGTTTGGAGAAGTTGGCGCACTTTATTGCAGACCTCAGAGCTTTATCATTAGAACAATGACTTTAACACAGCTTCTCAAGCTAAAAACTAGTACACTGATTGAAACAATGCAGGTTAAGAAAAAAGACAATATACAAATATTTAAAAATTTCCTTCAGCATTACACGCAGCTTATGGATCTTAGTATCAGAGATTTAATGGTAGATAGTGTGGAAGAAGAAGATCATGACATTGGAGACTCAAAAGGAAAAATTCCATTGCACATAGCAGCATCAAATGGGCATGAAGATTGTGCTACAGTTATGGTTAAGCATACATTAACTTACATTCGAGAGATGCCAATGGGACATGTGCATATATATACTAATGGATTTTCTGTATTAACCTTAAATGAAATGATGAGAAAGCGCAAAGTTGCTCACCAAATCAATGTGAAAGCGGCCATATCAAGTGAGTTTGTGTTAGACAGGAAGCAGCTAGAAGAGCAAAAGAACAATATGGGAAGGAACTTAATAAGATTACCTGATTCATCTGAGGATTTCACAACTATTGCAGGCTTATCAGTAAGGCAATCAGAGCTAGTGGAACTGGAACGAGACAGTAACGCCACCATTGCTGGCAGCACTGGCCTTAATGTGTTGTGCCAGTCACACAAGCTTGCGGCACTGCTGAGGAAGGCAGTCACGCCACCTGTGCTTGCGGCACTGGCTTGTCGAATCTCTATATAA 843 0.4009 MEKERVLETLQIIVSGEAEFIDYIMEKDRVLETLQTGDMFGEVGALYCRPQSFIIRTMTLTQLLKLKTSTLIETMQVKKKDNIQIFKNFLQHYTQLMDLSIRDLMVDSVEEEDHDIGDSKGKIPLHIAASNGHEDCATVMVKHTLTYIREMPMGHVHIYTNGFSVLTLNEMMRKRKVAHQINVKAAISSEFVLDRKQLEEQKNNMGRNLIRLPDSSEDFTTIAGLSVRQSELVELERDSNATIAGSTGLNVLCQSHKLAALLRKAVTPPVLAALACRISI 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182249g00001 280 ProSiteProfiles cAMP/cGMP binding motif profile. 1 92 IPR000595 -
Stsc182249g00001 280 PANTHER POTASSIUM CHANNEL AKT1 3 151 IPR045319 GO:0005249|GO:0006813
Stsc182249g00001 280 Pfam Cyclic nucleotide-binding domain 8 76 IPR000595 -
Stsc182249g00001 280 SUPERFAMILY cAMP-binding domain-like 8 92 IPR018490 -
Stsc182249g00001 280 SUPERFAMILY Ankyrin repeat 80 143 IPR036770 -
Stsc182249g00001 280 Gene3D - 74 186 IPR036770 -
Stsc182249g00001 280 CDD CAP_ED 12 76 IPR000595 -
Stsc182249g00001 280 Gene3D Jelly Rolls 2 73 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182249g00001 Stsc-Chr182249 2551 6921 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182249g00001 12 130 Ion Channels AT4G22200 52.101 3.17e-31 120