Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182219g00004 ATGCATATGTCAAATGATCATCTGCTAACCCTTTCAATACATGTCTACAGATATAACCTACTGGAATTAGTTGATCACTTCCACGAACGTGGCCTGTACCGTTCTATTTTTTTAAGTATCATGGAAGGTGAAGAATCTTTGAAGAGATTTTCACCTGCAATCACAATTCAAGATCCAAGCATCAAACAATCCATTCCTCTCTTGCCTCCTATATATCTTTTCCATGGAACTGCTGACTATTCCATACCATCAGCTGCAAGTGAACGGTTTGCCGAGGCGCTTAAGAAGGCAGGAGCAAATGCGGAGCTGATTCTATATGATGGGAAAACTCATACAGATTTGTTCCTCCAAGATCCGTTACGAGGCGGTAAAGATGACCTATTTGATCATATAGTTGATGTGATACATTCTAAGGACAAAGATGCTGTGACAAAGGGTAAAGTTCCACCACCAAGAAGAAGATTTGTTCCTGAGATTTTATTAAAGTTGGCTCGCAAGATCAGTCCCTTCTAA 513 0.4016 MHMSNDHLLTLSIHVYRYNLLELVDHFHERGLYRSIFLSIMEGEESLKRFSPAITIQDPSIKQSIPLLPPIYLFHGTADYSIPSAASERFAEALKKAGANAELILYDGKTHTDLFLQDPLRGGKDDLFDHIVDVIHSKDKDAVTKGKVPPPRRRFVPEILLKLARKISPF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182219g00004 170 Gene3D alpha/beta hydrolase 14 119 IPR029058 -
Stsc182219g00004 170 SUPERFAMILY alpha/beta-Hydrolases 59 132 IPR029058 -
Stsc182219g00004 170 Pfam Dienelactone hydrolase family 69 112 IPR002925 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182219g00004 Stsc-Chr182219 20152 21884 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182219g00004 18 170 Carbohydrate Esterase AT1G26120 63.399 3.82e-64 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182219g00004 K15889 - gmx:100788814 246.128