Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182215g00001 ATGGGGGCTAATGGCTTCGTTGAAGCACTTTTGCAGTTTCTGCAATCAGCTGTGTGTGAAGGAAATTTGATGGCCCAGGAGAATGGAGCAATGGCTCTTTTCAACCTGGCTGTAAATAATGACAGAAATAAGGAAATCATGTTGTCGGCAGGAGTATTATCATTGTTGGAGGACATGGTTTCAAACACTCCTTCATACGGTTGTGCAACTGCCCTATACGGGAATCTATCTACCCTTGATGAAGCCAAGCGCTTGATTGGTATGAGTCAGGCAGTTCAGTTCCTAATCGAGCTTCTTCAAGCTGATTCTGATATCCAAAGCAAGCAAGATTCTATCCATGCTCTCTATAATATTTCAACTGTGCCCTCCAACCTTCCTAACCTCCTTTCATCTGGCATCGTTGGCGGCCTACAAACCCTTCTCTTGGACCAGGGAGATTGCAGTTGGATAGAAAAATGTATAGCTATTTTGATAAACTTGGCTTCTTCCCAAGATGGGATAGAGGAAATTTTATCAACTCCGGGAATCATAGGCGCATTGGCTTCGATATTGGACACAGGCGAGCTCCAAGAGCAGGAGCAAGCTGTGTCTTGCCTCCTGCTTTTGTGCAATAGAAGTGAGAAATGTTGTGAGATGGTGCTACAAGAAGGCGTCATCCCTGCATTGGTTTCAATATCAGTGAATGGAAATCCAAGAGGGAGAGAAAAAGCTCAGAAGCTACTGATGCTGTTTCGAGAGCAGCGGCAACGAGACCATTCGTCAGTGCCGGTGGACACACATCAGTGCCCCCCCGAAACTGGTGATTTGTCAATGCCGCCTTCTGAAATGAAACCACAATGCAAGTCTATGTCTAGAAGTAAGACAGGGAGAGCTTTTAGCTTTTTCTGGAAAAGCAAGAGCTTTTCTGTCTATCAGTGTTAA 921 0.4506 MGANGFVEALLQFLQSAVCEGNLMAQENGAMALFNLAVNNDRNKEIMLSAGVLSLLEDMVSNTPSYGCATALYGNLSTLDEAKRLIGMSQAVQFLIELLQADSDIQSKQDSIHALYNISTVPSNLPNLLSSGIVGGLQTLLLDQGDCSWIEKCIAILINLASSQDGIEEILSTPGIIGALASILDTGELQEQEQAVSCLLLLCNRSEKCCEMVLQEGVIPALVSISVNGNPRGREKAQKLLMLFREQRQRDHSSVPVDTHQCPPETGDLSMPPSEMKPQCKSMSRSKTGRAFSFFWKSKSFSVYQC 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182215g00001 306 SUPERFAMILY ARM repeat 4 244 IPR016024 -
Stsc182215g00001 306 Gene3D - 142 250 IPR011989 -
Stsc182215g00001 306 Gene3D - 1 141 IPR011989 -
Stsc182215g00001 306 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 5 51 IPR000225 GO:0005515
Stsc182215g00001 306 PANTHER U BOX DOMAIN-CONTAINING 3 249 - -
Stsc182215g00001 306 MobiDBLite consensus disorder prediction 249 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182215g00001 Stsc-Chr182215 6205 7881 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182215g00001 1 305 U-box Gene Family AT1G24330 59.615 2.22e-115 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182215g00001 - - gmx:100794099 469.159