Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182213g00003 ATGGATTCCGATGTTGGCGTTGTGGAGAAAGATCCAACTGCGCGATATGTTCGGTATGATGAATTGTTGGGGAAAGGAGCGTTCAAGACTGTATATAAGGCGTTTGATGAAGTAGATGGAATAGAAGTGGCGTGGAACCAAGTCGACGTTGAGGATTTTTTGCAGTCACCGCAACAATTGGAAAGATTGTACTCTGAGGTTCATTTCCTCAAGTCATTGAAACATGAGAATATCATCAAATTCTACAATTCTTGGGTCGATGAAAAGACCCGGACTATCAACATCATCACTGAGTTGTTTACCTCCGGGAGTTTGAGGCAATATAGAAAGAAACACAAGAATATTGATATCAAAGCCATGAAGAACTGGTCGCGGCAGATTCTTCAAGGATTATGCTATCTGCATAGCCATAATCCTCCCATAATTCATAGGGATCTGAAATGTGATAACATTTTTGTCAACGGTAATAATGGACGTGTTAAGATTGGAGATCTTGGATTGGCAGTTGTGATGCAGCAGCCTCTTGCTCACAGTGTTATAGGCACACCGGAATTTATGGCGCCGGAGCTTTATGAAGAACAATACAATGAACTTGTCGACATATATTCTTTTGGCATGTGTTTGTTGGAAATGGTCACTTGTGAATACCCATATAGTGAATGTAGAAATCCAGCACAGATATATAAGAAAGTTACCTCTGGTATAAAGCCTGCCGCCCTTGCTAAAGTAAATAATTTGAAATTGAGAGAATTTATTGAGAAGTGTCTAGTTCCAGCATCTATGCGACCTTCGGCATCTGAACTATTGAAAGATCCATTCCTTGTTGCTGAAAGCCCGAAGGAGATCAATCATGATACGCGACTGCAGCTGACTAATCTGCCAATATCTGAGCCTTATCCCATGGAGATAGACTCAAGCTCCTGGCATACTTCACATGGTTCCTCTGTGAAAAGAATGGAAGAAACTTCTCTAGTTTCAGTATTTGATCTTCTGCAGGAGACTGAGAAAAATGAATTCAGGTTAAGAGGAGAGAAAACTGCTGGCGGTACATTTTCACTTACCCTGCGAATTGCCGATGCACATGGTCGAGCAAGGAATATCCATTTTCCGTTTTATGTCCATTCTGACACAGCAATTTCAATTGCTGTGGAGATGGTTGAACACCTGGGACTTGCGAATGACGATGTAACTGTCATTGCTGAGCTAATACACAACATGATTCTGAAGCTCACGTCCAACACGAAACCATCCTCTTATAACCTCTCATCTGGAGGAGGTCACTTGTACAAGCCTTCGGAAGATCTTCAGAGCCAGGGAACATCAAGTTGCCAGTCGCCATCCCTATCAAGTGCATTTGATAGAAAAGCAATTCAAGATGATTATGTTCACTTACATGATGATGGAGAAGATCATTGTAAACAAGAATCTGTTATGTCAGAGATTTCATCAGAGTATGGGACTGCACTTGCTTTGGATTCTAAGAGTGAAGAGCATGACATTTTTAGTATGGACGGATGCTGCAAAGGTTCCAATGGCTTCATTACCAATTCAGATGCCAGATTCTGTGCTCATGATGATAATGAACAAAAGAATGATGTTGACCAATCAGAGAACTCAGCAGGCATTTTAATCAATTCACATTGCAGTGCATTCGAAAACTTTGACGTGTCAAACATATGTTCCCTTACTCTAGGCGACATAGATAATTCAACCGATCTGCAGCTGGAGCTTGATGCAATAGAAACACAGTATCACCAATGTTTTCGCGAGCTCGTGAAGATGAGGGAGGACGCCATAGAAAACGCCAAAAGGAGGTGGATAACAAGGAAGAAAATATCAGTTATGTGA 1848 0.4134 MDSDVGVVEKDPTARYVRYDELLGKGAFKTVYKAFDEVDGIEVAWNQVDVEDFLQSPQQLERLYSEVHFLKSLKHENIIKFYNSWVDEKTRTINIITELFTSGSLRQYRKKHKNIDIKAMKNWSRQILQGLCYLHSHNPPIIHRDLKCDNIFVNGNNGRVKIGDLGLAVVMQQPLAHSVIGTPEFMAPELYEEQYNELVDIYSFGMCLLEMVTCEYPYSECRNPAQIYKKVTSGIKPAALAKVNNLKLREFIEKCLVPASMRPSASELLKDPFLVAESPKEINHDTRLQLTNLPISEPYPMEIDSSSWHTSHGSSVKRMEETSLVSVFDLLQETEKNEFRLRGEKTAGGTFSLTLRIADAHGRARNIHFPFYVHSDTAISIAVEMVEHLGLANDDVTVIAELIHNMILKLTSNTKPSSYNLSSGGGHLYKPSEDLQSQGTSSCQSPSLSSAFDRKAIQDDYVHLHDDGEDHCKQESVMSEISSEYGTALALDSKSEEHDIFSMDGCCKGSNGFITNSDARFCAHDDNEQKNDVDQSENSAGILINSHCSAFENFDVSNICSLTLGDIDNSTDLQLELDAIETQYHQCFRELVKMREDAIENAKRRWITRKKISVM 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182213g00003 615 SUPERFAMILY Protein kinase-like (PK-like) 20 309 IPR011009 -
Stsc182213g00003 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Stsc182213g00003 615 FunFam probable serine/threonine-protein kinase WNK9 100 279 - -
Stsc182213g00003 615 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 352 407 IPR024678 GO:0004674|GO:0005524
Stsc182213g00003 615 ProSiteProfiles Protein kinase domain profile. 17 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc182213g00003 615 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc182213g00003 615 Gene3D Transferase(Phosphotransferase) domain 1 100 280 - -
Stsc182213g00003 615 SMART serkin_6 17 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc182213g00003 615 FunFam Probable serine/threonine-protein kinase WNK1 2 98 - -
Stsc182213g00003 615 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Stsc182213g00003 615 CDD STKc_WNK 15 274 - -
Stsc182213g00003 615 Gene3D - 349 433 - -
Stsc182213g00003 615 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 8 507 - -
Stsc182213g00003 615 MobiDBLite consensus disorder prediction 421 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182213g00003 Stsc-Chr182213 6873 10551 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182213g00003 8 614 MAP Kinase Kinase Kinase AT5G41990 51.391 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Stsc182213g00003 Pkinase 7e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182213g00003 K08867 - gmx:100783717 799.66