Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182205g00002 ATGGCAATAACGTTAAAAGAGTGTTACATGGTGAGGCCTAATGAGCCAACATGGTGTGGTAGGTTACCATTATCGGAATGGGACCAAATAGGAACCATAACACATGTTCCGACAATCTACTTCTATCGTTCCCCCCAAACCTTAAACATTTCCACCATTGCCAAAAACTTGAAGGATTCCTTAAGTCGTGCCTTAGTGCCATTTTATCCCATGGCTGGTCGTTTACACTGGATAGAAAACGGTCGAATTGAGCTCCAATGCAACAGCATGGGAGCTCAATTCATTGAAGCTGAATCGTCATCAACCCTCGAAGAGGTTGGTGACTTGTCGCTATCATCGGAGTATCTATGCCATCTTTCTCCAAACGTGGACTATACACTCCCCATTCATGAGTTGCCATTGGTCATTGTTCAACTCACGACGTTCAAGTGCGGTGGATTTGGCCTCAGCTTGGCAATTTCTCATGCCGTTGCCGATGGACAAAGTGCGTTGCATTTTATCAACGAGTGGTCGAGGTTTGCCCGTGGCGAGCCCTTGGAAATGGTGCCGTTTCTTGATAGGAAAGTCTTGCGTGCCGGGGAACCACCTTTGGCGCCGCCGTTGCCAGCCGCGTGCCACAGCCGCTCGGAGTTCGAACACCCTCCGTTATTGCTTGGGCAGTCTACCAACATGGAGCAGAGGAAAAAGAAAACCACGGTGGCCATTTTCAAGTTGAGCAAACAACAAGTTGATGGCTTGAGGAATTTGGCAAATCTCAGTTGGGGCAACCCTAGCAATGGTCGTGGTTATACAAGGTACGAAACCGTAGCGGGGCACGTGTGGAGATGCGCATGCAAGGCAAGGGAACACAAAGTTGAGCAACCAACGTGTTTAGGGGTGTGTGTGGATTCGAGGTGTCGCATGAAGCCGCCATTGCCAAAAGGGTACTTCGGTAACGCAACCTTGGACGTGGTTGCAACCTCTCTTTCGGGTGATTTGGTTTCAAGGCCGTTAGGGTATGCTTCAAGCAGAATAAGGGAAGCCATTGAGAAGGTAAATGATGAGTACATAAAGTCAGAGATTGAGTTCTTGAAGAACCAAAAGGATTTGAGCAGGTTTCAGGATCTTCATGCTATAAGTAGTGACAAGGGTCCATTCTATGGTAACCCTAACATGGGTGTGGTTAGTTGGTTGACTTTGCCGGTCAACGGCCTTGACTTTGGATGGGGAAAAGAAGTTCAAATGTATCCCGGGACACATGAATTTGATGGTGATTCTGTTCTTCTTCCTGGTCTTGAAGGTGATGGTTCTGTTGTTCTTGCTATATGTTTGCAAAAAATGCGGAAGTCAGCTTCCACCATTGCCAAACATTCTTGA 1356 0.4742 MAITLKECYMVRPNEPTWCGRLPLSEWDQIGTITHVPTIYFYRSPQTLNISTIAKNLKDSLSRALVPFYPMAGRLHWIENGRIELQCNSMGAQFIEAESSSTLEEVGDLSLSSEYLCHLSPNVDYTLPIHELPLVIVQLTTFKCGGFGLSLAISHAVADGQSALHFINEWSRFARGEPLEMVPFLDRKVLRAGEPPLAPPLPAACHSRSEFEHPPLLLGQSTNMEQRKKKTTVAIFKLSKQQVDGLRNLANLSWGNPSNGRGYTRYETVAGHVWRCACKAREHKVEQPTCLGVCVDSRCRMKPPLPKGYFGNATLDVVATSLSGDLVSRPLGYASSRIREAIEKVNDEYIKSEIEFLKNQKDLSRFQDLHAISSDKGPFYGNPNMGVVSWLTLPVNGLDFGWGKEVQMYPGTHEFDGDSVLLPGLEGDGSVVLAICLQKMRKSASTIAKHS 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182205g00002 451 FunFam Tryptamine hydroxycinnamoyl transferase 219 446 - -
Stsc182205g00002 451 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 437 - -
Stsc182205g00002 451 Gene3D - 220 443 IPR023213 -
Stsc182205g00002 451 Pfam Transferase family 2 440 - -
Stsc182205g00002 451 Gene3D - 1 212 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182205g00002 Stsc-Chr182205 4808 7283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182205g00002 1 438 Monolignol Biosynthesis Gene Families AT5G48930 38.952 3.26e-102 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182205g00002 K13065 - gmx:100777007 626.706