Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182200g00001 ATGTTCTCCACCAAAATCCTTGATGCAAGCCAAGAACTTAGGAGCAAGAAGGTGCAAGAACTCATTAGTGATGTTCATGCATGTAGTTTAAATGGTGAAGCAATTGAAATTGGAAGGCTATCATTTAAGATGCTAATCAATTCATTGTCAAACACATTTTTCTCCATGGATCTTGTTGAATCTATAGGTGAAACTGATGAGTATAAGGACATGGTGGTGAATTTGGCTAGAGCAATTGCAACACCAAACTTGGGAGATGTTTTTCCATTGTTGAAGATATTTGACCTACATGGCATAAGGTGGTCTTCAAGAACTTACATTCCCATGTTGTTTGGTATTTTTAATGGCCATATTGAGAAAAGGTTGAAGCTAAGAGAAGAAGAGGATTATGTAGCAAAGCCAAAGAAGGATGTCTTAGAGGAACTGCTCAACATTTCTCAAGACAATGGCCAGAAGATGGACAAAGAAAAGATCAAACATTTGTTCTTGGATCTAATCATTGCTGGAATAGATACGAGTTCATATGTAGTGGAACGAGCAATGACTGAACTACTTCACAACCCAAATATAATGTTAAAAGCAAAAATGGAACTAGAGAAAACAATTGGAGTAGGTAACCCTGTTGAAGAATCACAAATTGAAAATCTTCCATACTTAGAAGCAATAATAAAAGAGACATTACGTAAGTACCCACCAGCGCCGTTTTTGTTGCCAAGAAAAGCCAAAGAAACTGTTGAAATTCATGGCTACATTATTCCAAAGGGTGCACAAGTTATAATCAACGAATGGGCCATTGGTAGAAACCCTAAAATATGGGATGATCCAAATTTGTTTTCGCCAGAGAGTCTCAGGGGCCTCTCTCGAACGCACTCGCCGCCGATCTCTCACCTTCCCACCTCCGCCGCTTGCACCGCCGTTGGTCTCGCCCGTTCACGAACAAGATCGTTGCCTTCTGTTGTTGCTACATCGCAGGATTCTCCACTCTTCGCACTTCCAATTCCGACGCCAATAGCTGCTAGTGTTTGGTCTAGATCAAGAGGAAAAAGGTGGATTCAAGGCTTCCATGTTCATCTTTGTGTTGTCTGCATTTGA 1092 0.4066 MFSTKILDASQELRSKKVQELISDVHACSLNGEAIEIGRLSFKMLINSLSNTFFSMDLVESIGETDEYKDMVVNLARAIATPNLGDVFPLLKIFDLHGIRWSSRTYIPMLFGIFNGHIEKRLKLREEEDYVAKPKKDVLEELLNISQDNGQKMDKEKIKHLFLDLIIAGIDTSSYVVERAMTELLHNPNIMLKAKMELEKTIGVGNPVEESQIENLPYLEAIIKETLRKYPPAPFLLPRKAKETVEIHGYIIPKGAQVIINEWAIGRNPKIWDDPNLFSPESLRGLSRTHSPPISHLPTSAACTAVGLARSRTRSLPSVVATSQDSPLFALPIPTPIAASVWSRSRGKRWIQGFHVHLCVVCI 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182200g00001 363 SUPERFAMILY Cytochrome P450 1 281 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc182200g00001 363 PRINTS E-class P450 group I signature 220 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc182200g00001 363 PRINTS E-class P450 group I signature 261 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc182200g00001 363 PRINTS E-class P450 group I signature 177 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc182200g00001 363 PRINTS E-class P450 group I signature 157 174 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc182200g00001 363 Pfam Cytochrome P450 6 281 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc182200g00001 363 Gene3D Cytochrome P450 1 301 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc182200g00001 363 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182200g00001 Stsc-Chr182200 2720 6222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182200g00001 1 285 Cytochrome P450 AT2G45550 39.373 9.29e-73 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182200g00001 - - aip:107610932 405.216