Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182197g00002 ATGACTTCTCGGGTATTTTGGGAGATCATGGCATTGGCTTTTTTTGAGATGGAGCACATGAAGATTAAGGAGGTAGCATGTCAAGCAAAAGTGATTGGCACTTTTGGAGGAACATTAGTTATGGCACTCTACAAAGGCACCGTTGTTACCGTTGCGGGGCCCACCAAGGCGGAGAGTGTGAACAGCCATTGGGCGATAGGGACATGTTTTCTTCTCATCGGTTGCATAGGCTTCTCTGCCTTTTACATATTGCAGGCTATAACATTGAGCAAGTACCCGGCAGAGATGTCCCTCGCAACATTGGTCTGCTTCGCCGGAGCACTTCAGAGTTCACTTGTGGCAGTTTACGCCGAGCGCCACCGTCCTCATCGGTGGTCTCTCGGTTGGGATATCAGGCTCTTTGCTCCAGCTTATGCGGGAATAGTAACATCAGGTGTCCAATACTATATACAAGGGATGGTTAGTAAGGATATGGGCCCAGTAATTGTAACTGCCTTTAATCCATTGCGTATGGTCATTGTTATTGCATTGGCTTGCATTATTCTCTCTGAGAAACTCTACCTAGGAAGCATAATAGGAGCAATAGTGGTGGTTGGCGGGCTATATATTGTGGTGTGGGGGAAATCAAAAGAGCAGAAAGCAAAGGAGAATTCTTCTGGTTCAATCATTCAGGATCTTCATCAAGAATGCAATACACAAATCCACCACTAA 711 0.4599 MTSRVFWEIMALAFFEMEHMKIKEVACQAKVIGTFGGTLVMALYKGTVVTVAGPTKAESVNSHWAIGTCFLLIGCIGFSAFYILQAITLSKYPAEMSLATLVCFAGALQSSLVAVYAERHRPHRWSLGWDIRLFAPAYAGIVTSGVQYYIQGMVSKDMGPVIVTAFNPLRMVIVIALACIILSEKLYLGSIIGAIVVVGGLYIVVWGKSKEQKAKENSSGSIIQDLHQECNTQIHH 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182197g00002 236 Pfam EamA-like transporter family 66 205 IPR000620 GO:0016020
Stsc182197g00002 236 SUPERFAMILY Multidrug resistance efflux transporter EmrE 125 210 - -
Stsc182197g00002 236 PANTHER WAT1-RELATED PROTEIN 6 216 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182197g00002 Stsc-Chr182197 18535 21087 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182197g00002 15 229 Nodulin-like Gene Family AT2G39510 41.593 5.65e-56 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182197g00002 - - gmx:100811984 305.449