Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182197g00001 ATGGAGGAGCAGAAGAATAGCGGTAGCGGAAAGTGGAGTGAGGGGTTTCATAGGTTGAAGCCATATCTAGCCATAATATCCCTGCAATTTGGGTACTCCGGGATGTACATAATAACCATGGTTTCATTCAAACATGGCATGAGTCATTGGATACTCTCTGTTTATCGCCATGTTGTTGCTGCCGTCATCATAACCCCTTTTGCTCTTGTCCTTGAAAAAAAAATAAGGCCAAAGATGACCCTTCCCATCTTCCTCAGGATTGTGGCGCTTGGATTACTTGAGCCAGTGCTAGATCAGAATTTGTACAACATGGGGATGAAGACGACATCAACAACGTTTGCATCCGCCACAGTTAATGTCCTCCCAGCCATTACTTTTATAATGGCACTCATTTTCAGGTTAGAGTCAGTTAACTTCAAAAAATTCCAAAGCGTAGCTAAGGTAATTGGAACCGCAATAACGGTATCTGGAGCCATGGTTATGACTTTGTACAAAGGCCCAGCCTTTCAGCTCATAAAGGGAGGAGGAGCCTTCGCCCACCACGGCAGCGCCGACACCACCGATACCTCCGACCAGCATTGGGCCTTGGGAACACTTGAGCTCATTGCCAGCTTAGTCAGTTGGGCCGGCTTCTTCATTTTGCAATCATTCACTCTGAAGAAGTACCCAGCAGAACTATCCCTCACAGCGTGGATTTGCGTTATGGGCATTGTTGAGGGCTCAATTGCATCATTTATCTTTGAGAGGGACTTAAGCGTTTGGGTCATAGGCTGGGATTCAAGGCTTCTTGCTTGTGTTTATTCAGGAGTGGTATGTTCTGGAATGGCATACTACGTACAAGGTGTTGTGAGCAGGGAACGTGGACCAGTTTTCTTGACTTCTTTCAGCCCTCTATGTATGATCATCACTGCTGCGTTGGGTTCCCTTGTCTTAGCTGAAAAAGTTCATATGGGAAGCGTGTTCGGAGCAATTCTAATAGTGTGCGGGCTCTACACGTTTGTATGGGCGAAAAGCAAAGACAAAAGAGAGACAAGAAAAGAAGGTGAAGATGAAGGGTTGCCAATAAAGGATGGTGTAAGATCATCAGAACCGGAAGTTTTTGATGGAATCGAGATCAACGGCCATGATCCCATGATTTTGAAGAAAGGTGCAGGGAACAAGAGTAGTAGTGGTGTTCCACCTACCTCATGA 1191 0.4576 MEEQKNSGSGKWSEGFHRLKPYLAIISLQFGYSGMYIITMVSFKHGMSHWILSVYRHVVAAVIITPFALVLEKKIRPKMTLPIFLRIVALGLLEPVLDQNLYNMGMKTTSTTFASATVNVLPAITFIMALIFRLESVNFKKFQSVAKVIGTAITVSGAMVMTLYKGPAFQLIKGGGAFAHHGSADTTDTSDQHWALGTLELIASLVSWAGFFILQSFTLKKYPAELSLTAWICVMGIVEGSIASFIFERDLSVWVIGWDSRLLACVYSGVVCSGMAYYVQGVVSRERGPVFLTSFSPLCMIITAALGSLVLAEKVHMGSVFGAILIVCGLYTFVWAKSKDKRETRKEGEDEGLPIKDGVRSSEPEVFDGIEINGHDPMILKKGAGNKSSSGVPPTS 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182197g00001 396 MobiDBLite consensus disorder prediction 374 396 - -
Stsc182197g00001 396 MobiDBLite consensus disorder prediction 345 364 - -
Stsc182197g00001 396 PANTHER WAT1-RELATED PROTEIN 21 344 IPR030184 GO:0016020|GO:0022857
Stsc182197g00001 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 259 339 - -
Stsc182197g00001 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 165 - -
Stsc182197g00001 396 Pfam EamA-like transporter family 30 152 IPR000620 GO:0016020
Stsc182197g00001 396 Pfam EamA-like transporter family 197 333 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182197g00001 Stsc-Chr182197 4918 8653 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182197g00001 18 373 Nodulin-like Gene Family AT4G08300 65.659 7.13e-170 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182197g00001 - - gmx:100811114 624.009