Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182179g00003 ATGGATGCCATGAATGTCACTTTTACAAGCCCTGGAACTTCCAAGAACCGTTATGTCGGAATTTGGTATAACAAAGATCCAACAAAGGCAATAGTATGGGTTGCAAATAGAGAAAAACCCATCACTGACTCATCAGGGGCTTTGAAGGTCACAGACACCGGAGTTCTAGTCCTTGTCAACCATAATAACACTGTAATTTGGTCATCCAGCACAACAAGATCGGCACGAAATCCAGTTGCAAAGCTTTTGAATTCCGGGAACTTTGTTGTGCAGGATGAAAGCAATGGCAACACAGAAGATTTTCTGTGGCAAAGTTTTGATTATCCAGGGGACACAATCTTGCCCGGACAGAAGTTCGGAAGAAACTTCTCTACAGGACTAAATTGGGGGACAACATCATGGAAAAGCTCTGATGATCCTTCTCAAGGTAACTTTAGCTATCAATTCGAAATTGATGGATATCCACAGTTAGTATTCAGGGAAGGCACCACAAAAAGATTTAGTTTTGGATCATGGAATGGTATTCAATTTAGTGGGGCGCCTATATTTAAAAATGTGTCTATTTATAGATATGTGGTGGTTTCTGATGAGGAAGAATTATATTTTATATATTGGGTTGTTGATAGTTCAATTCATCAAAGGCTGCAGATATCATTGGATGGATTCAGCCAGCGGAAAAGTTGGAGTAGTGAAGATACAGGTTGGATCACAGTTTCGCACTTACCGGCCGATGACTGTGATTATTATGGAAAGTGTGGAGCATATGCTAGCTGTGACACAAACAGTTTTCCCATATGCAATTGCTTGGATGGTTTTGTGCAGAATGCAGCTGATGCATCAGGTGGTTGTGTTAGGAGGACTTCATTGAGTTGCAATAGTTCAGATGGGTTTGTGAAGTTTTCGGGGCTAAAATTACCGGACACTGAAGGGACATGGTTTAATCGAAGTATGAGGTTTGAGGATTGTAGGATCTTGTGCTTGAACAATTGCTCTTGTATGGCTTATGCAGCTTTGGATATCAGCAAAGGGCCAGATTCAAATGGTTGTATACTTTGGTTTGGTAAGTTGATGGATATGAAAGTGCTGACAGCATATGATGAAGATATTTATGTAAGGATGGCAGGGAAAGATGTAGAAGCTGTTGAAAGACAAAGATTGCAGAAATCCAAGAAATGGAAGCAAAAGATTATCATTGTCGTAAGCAGCGTGTTGTCTTTTGGAATTTTGATCCTATGCTTGGCCTTCATCATTTATAGATCGAAGAAGATGCGAAAGAAAGGAATGATAAAAGAAGAAAGAGAAATAATAAATAGTCAGCATGATGAGGATCTAGATTTGCCCATATTTGATATAGACACACTTACTTCTGCAACAAATAATTTCTCAACTGACAACATATTAGGGAGAGGTGGTTTTGGAGCAGTTTATAAGGGTGTCTTGAAAGATGGACAGGAAATAGCTGTCAAGAGGCTCTCACAGAATTCAAGCCAAGGATTCCAAGAGTTCAAAAATGAAGTTGCATGTTGCCAAACTTCAGCACAGGAATTTAGTAAAGCTACTAGGATGCTGCATTCAAGCAGGGGAAAGATTGTTGATTGTGAGAAGGGAAAGCTACTAGACTGGCCGAAGCGTTTTCTTATCCTAAATGGGATCGCGAGAGGCCTTCTTTATCTCCATCAAGATTCAAGACATAGAATAGTTCACAGAGATCTCAAGGCAGGGAATATTTTGTTAGATGATGAATGGAACCCTAGAATCTCGGACTTTGGAATAGCAAGAAGCTTTGTAGGAAACGAAAACGGAGCTATAACAAGCCATATTGTTGGAACTTAG 1833 0.3993 MDAMNVTFTSPGTSKNRYVGIWYNKDPTKAIVWVANREKPITDSSGALKVTDTGVLVLVNHNNTVIWSSSTTRSARNPVAKLLNSGNFVVQDESNGNTEDFLWQSFDYPGDTILPGQKFGRNFSTGLNWGTTSWKSSDDPSQGNFSYQFEIDGYPQLVFREGTTKRFSFGSWNGIQFSGAPIFKNVSIYRYVVVSDEEELYFIYWVVDSSIHQRLQISLDGFSQRKSWSSEDTGWITVSHLPADDCDYYGKCGAYASCDTNSFPICNCLDGFVQNAADASGGCVRRTSLSCNSSDGFVKFSGLKLPDTEGTWFNRSMRFEDCRILCLNNCSCMAYAALDISKGPDSNGCILWFGKLMDMKVLTAYDEDIYVRMAGKDVEAVERQRLQKSKKWKQKIIIVVSSVLSFGILILCLAFIIYRSKKMRKKGMIKEEREIINSQHDEDLDLPIFDIDTLTSATNNFSTDNILGRGGFGAVYKGVLKDGQEIAVKRLSQNSSQGFQEFKNEVACCQTSAQEFSKATRMLHSSRGKIVDCEKGKLLDWPKRFLILNGIARGLLYLHQDSRHRIVHRDLKAGNILLDDEWNPRISDFGIARSFVGNENGAITSHIVGT 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182179g00003 610 Pfam D-mannose binding lectin 31 135 IPR001480 -
Stsc182179g00003 610 SUPERFAMILY alpha-D-mannose-specific plant lectins 31 140 IPR036426 -
Stsc182179g00003 610 SUPERFAMILY Protein kinase-like (PK-like) 446 610 IPR011009 -
Stsc182179g00003 610 CDD PAN_AP_plant 287 374 - -
Stsc182179g00003 610 SMART ntp_6 292 373 IPR003609 -
Stsc182179g00003 610 Pfam S-locus glycoprotein domain 168 274 IPR000858 GO:0048544
Stsc182179g00003 610 ProSiteProfiles Bulb-type lectin domain profile. 1 103 IPR001480 -
Stsc182179g00003 610 FunFam Os07g0541700 protein 522 610 - -
Stsc182179g00003 610 Gene3D Phosphorylase Kinase; domain 1 435 518 - -
Stsc182179g00003 610 CDD B_lectin 8 109 IPR001480 -
Stsc182179g00003 610 Pfam PAN-like domain 291 359 IPR003609 -
Stsc182179g00003 610 Gene3D - 2 106 IPR036426 -
Stsc182179g00003 610 Pfam Protein kinase domain 462 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc182179g00003 610 ProSiteProfiles Protein kinase domain profile. 461 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc182179g00003 610 Gene3D Transferase(Phosphotransferase) domain 1 521 610 - -
Stsc182179g00003 610 SMART serkin_6 461 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc182179g00003 610 ProSitePatterns Protein kinases ATP-binding region signature. 467 489 IPR017441 GO:0005524
Stsc182179g00003 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 566 578 IPR008271 GO:0004672|GO:0006468
Stsc182179g00003 610 ProSiteProfiles PAN/Apple domain profile. 291 374 IPR003609 -
Stsc182179g00003 610 SMART blect_4 2 109 IPR001480 -
Stsc182179g00003 610 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182179g00003 Stsc-Chr182179 5179 8518 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182179g00003 332 610 Receptor kinase-like Gene Family AT4G21410 37.261 9.24e-49 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DSLV Stsc182179g00003 Pkinase 3.4e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182179g00003 - - adu:107462379 914.45