Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182179g00002 ATGGTTAAAGGGCTGTACTCAACAAAATCCGACGTCTATAGCTTTGGTGTACTAGCACTAGAGATAGCTAGCGGAAAGAGAAATAGAGGATTCATCAATATTGATCAGAATCTTAATCTTCTTGGGCATGCATGGACACTCTTTGCAGAAGGAAAATGCTTAGAAATAGTGGATGCATCGATCAGAGAGTCGATTAAATTACCAGAAGTGATTAGAACAATTCATGTTGGTCTACTTTGCGTGCAACGGAATCCAGAAGATCGACCAAGCATGTCGCATGTGCTTACGATGCTGAGTAGTGAATACGCATTGCCTCAGCCAAAGAAGCCAGGGTTCTTCATTAAGAGAGATGTGGTTGGTGAGAATTCTTCATCAAGCAACAATCAAGTCTCAAGGTCAATCCACGATAGAATTTGGTTCAGAAGACAGTCCCAAAGCAAAGATGCTTTAAATGAAAGAGTGAACTACCCGGCCATGTCCATTTTCCAAACGACATCGCGCCCCTAA 507 0.4221 MVKGLYSTKSDVYSFGVLALEIASGKRNRGFINIDQNLNLLGHAWTLFAEGKCLEIVDASIRESIKLPEVIRTIHVGLLCVQRNPEDRPSMSHVLTMLSSEYALPQPKKPGFFIKRDVVGENSSSSNNQVSRSIHDRIWFRRQSQSKDALNERVNYPAMSIFQTTSRP 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182179g00002 168 Gene3D Transferase(Phosphotransferase) domain 1 1 112 - -
Stsc182179g00002 168 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 131 - -
Stsc182179g00002 168 Pfam Protein tyrosine and serine/threonine kinase 3 97 IPR001245 GO:0004672|GO:0006468
Stsc182179g00002 168 SUPERFAMILY Protein kinase-like (PK-like) 4 112 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182179g00002 Stsc-Chr182179 4038 5202 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182179g00002 2 137 Receptor kinase-like Gene Family AT4G23150 45.390 2.20e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc182179g00002 PK_Tyr_Ser-Thr 3.1e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182179g00002 - - adu:107462379 211.46