Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182172g00005 ATGGTTTCGAGGTCATATTCTAACTTGTTAGAGCTTACTTCGTGTGACTCGCCGACTTTCGGCCGCGAAAAGAAAAGGCTTCCTCGTGTGGCGACTGTTGCCGGAGTGCTGTCTGAGCTAGACGACGAGGCAAGCAACAGTGCTGGTTCGGACGCTCCCTCCTCGATCTCTCAAGATAGGATGATCATAGTAGGTAACCAGCTTCCGTTAAAGGCACACAGAAAAGACAATGGTACTTGGGACTTCACATGGGACGAGGACTCGCTTCTTTTGCAGCTCAAAGATGGTCTTGGTGAAGATGTAGAAACTATTTACATTGGTTGTCTAAAGGAAGAAATCGAACCGAGTGAGCAAGATGATGTTGCTCAGTACTTGCTTGACACATTCAAATGTGTTCCCACTTTCCTCCCACCAGAGCTTTTTACCAAATTCTATCACGGATTCTGCAAACAACATCTGTGGCCTTTGTTTCACTACATGCTTCCGCTCTCGCCTGATCTCGGTGGTCGATTTGATAGGTCCCTTTGGCAAGCTTATGTTTCTGTGAACAAGATATTTGCGGATAAAGTAATGGAAGTGATTAGCCCTGATGATGATTTTGTATGGGTTCATGATTATCATCTCATGGTTCTTCCAACATTTCTGAGAAAGAGGTTCAATAGGGCAAGGCTAGGATTCTTCCTTCACAGTCCATTCCCTTCCTCCGAGATATACCGAACCCTCCCTTAG 729 0.4568 MVSRSYSNLLELTSCDSPTFGREKKRLPRVATVAGVLSELDDEASNSAGSDAPSSISQDRMIIVGNQLPLKAHRKDNGTWDFTWDEDSLLLQLKDGLGEDVETIYIGCLKEEIEPSEQDDVAQYLLDTFKCVPTFLPPELFTKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRARLGFFLHSPFPSSEIYRTLP 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182172g00005 242 Gene3D Glycogen Phosphorylase B; 49 242 - -
Stsc182172g00005 242 FunFam Trehalose-6-phosphate synthase 8 55 242 - -
Stsc182172g00005 242 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 33 242 IPR001830 GO:0003824|GO:0005992
Stsc182172g00005 242 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 242 - -
Stsc182172g00005 242 Pfam Glycosyltransferase family 20 60 242 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182172g00005 Stsc-Chr182172 18207 19027 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182172g00005 1 242 Trehalose Biosynthesis Gene Families AT4G17770 79.835 5.55e-142 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182172g00005 K16055 - gmx:100782799 482.641