Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182169g00004 ATGCTTCAAAAAATGGTCACAAAAACCCAACAGAACAGCTCTCCATATTCACTCACATCCTCTCCTCCAACACCTTCTTCAAAGAACTTTGAGGTTGATGAGATGTTAATAGACAAAGGGCAAGAACAAGTTGGAGGTGAAACAATGGTGGGGACTCCCATTAGTGGAAGATCAAGGCAAGCTTTTTCACTTCTGAATGGTGTTGGTGGTGGCGGCCATGATCTTACTCCTGGTAGTGCTCCACCAAGCAATGCTGGATCAGACTATGGCATAATAGAGTTCACAAGAGAGGATGTGGAATCACTTTTAAATGAGAAATCCAAAAGGAAAGACCGGTTTAATTACAAGGAAAGATGTGAAAATATGATTGATTATATAAAAAGGCTTAAGGTTTGCATAAGATGGTTCCAAGACCTTGAGATGAGCTACTCACTAGAACACGAGAGGTTGAAGAACTCATTGGAACTAACACAGCAAAAATGCATGGAAATTGAGTTGCTGCTAAAGATCAAGGAAGAAGAACTGAACTCAATTATCACAGAAATGAGAAGGAATTGCACTAATTTGCAAGAAAAATTGATCAAGGAAGAAACAGAAAGGGCGTCTGCAGCAGAATCTCTCGAGAAAGAGCGGGAGGCCAGGATTAACATCGAGAGGTCACATACCACTTTGTCTGAGGACCTTGGGAGAGCACAAAGAGAGATCCAAAGTGCAAATCAGAAGATATCCTCGCTCAACGAGATGTATAAACGGTTACAGGATTACATAACAAGCTTACAACAGTATAATGGAAAACTTCATACAGAGCTTTCAACAGTTGAAGATGAACTAAAACGTGTTGAGAAAGAAAAGGCTACTGTGATGGAGAATATCACCATGTTAAAGGGTGAACTTACATTATCCATTGCTTCTCAAGAAGAGGCTGTAAAACAGAAGGATGTTCTAGTTAGTGAAGTTGCTTCTCTTAGAGGAGAGTTGCAACAAGTAAGAGAAGAACGAGACCGACAACTGTCTCAAGTGCAAATGCTGAGTTCCGAGTTAGAGAAAGTTAAAGAATCTACTGAAAACTCATCTTCTGAACTGGACAAGTTGACTTTTAAAGCAAATGAACTAGAGGCAAAATGTTCTTTGAAAGATAATCAGATAAAGGAATTGAATGAGCAGCTAGCAACTGCAGAGAAGAAACTTCAGGTGTCTGATATATCAGTAATTGAGACAAGGACTGAATATGAAGGGCAACAGAAATTCATAGATGAGTTACAACGACGCTTGGCGGATGCAGAATATAAACTTATAGAAGGGGAGATGCTGCGGAAAAAATTACACAATACCATTTTGGAATTAAAAGGGAACATCCGTGTTTTCTGTCGAGTGAGGCCATTGTTGCCGGATGAAAGCTGTAGTACAGAAGGCAAGATCTTCAGTTATCCAACATCAATGGAAGCTTCTGGAAGAGCCATTGACCTAGCTCAAAATGGCCAAAAACATTCTTTTACCTTTGATAAAGTTTTTGCACCGGAGTCATCACAAGAAGAAGTTTTTGTAGAAATTTCACAGCTTGTACAAAGTGCTCTTGATGGTTATAAGGTTTGCATTTTTGCCTATGGTCAAACAGGATCAGGGAAAACATATACAATGATGGGCAGGCCTGGACATCCTGAGGAAAAGGGGTTGATACCTCGCTCGTTAGAACAAATATTTCAAACAAAACAGTCTCAGCAGCCTCAAGGCTGGAAATACGAAATGCAGGTGTCGATGTTGGAAATATACAACGAAACCATTCGTGATCTGTTATCCACAACACGCCAAGAAAGTGGTACTCCTGGAAAACAATATACAATTAAACATGATGCAAGTGGAAATACACATGTTTCTGATCTCACAGTAGTCGATGTTCAGAGTGCTAGAGAGGTTGCATTTCTATTGAACCAAGCTGCAAATAGCAGGTCGGTGGGAAAGACCCAGATGAATGAACAATCATCAAGAAGTCATTTTGTATTCACTCTTAGAATATATGGTGTAAATGAGAGCACTGAACAACAAGTGCAAGGAGTTCTGAATCTTATTGATCTTGCCGGTAGTGAGCGTCTATCGAAAAGCGGTTCAACCGGGGACAGGTTAAAAGAGACTCAAGCAATCAACAAAAGTTTGTCATCTTTGAGTGATGTAATATTTGCCTTGGCAAAGAAGGAGGATCATGTGCCATTCAGGAACTCAAAGCTTACCTTTCTACTTCAGCCATGTCTAGGTGGGGACTCAAAGACACTGATGTTTGTTAACATCTCACCTGAGCCATCTTCACTTGGTGAGTCACTTTGCTCACTCAGGTTTGCTTCCAGAGTCAATGCTTGTGAGATCGGAACTCCTCGTCGCCAAACCAACGGAAGATCCACCGAATCACGATTGAGCTACTTCTAA 2418 0.4065 MLQKMVTKTQQNSSPYSLTSSPPTPSSKNFEVDEMLIDKGQEQVGGETMVGTPISGRSRQAFSLLNGVGGGGHDLTPGSAPPSNAGSDYGIIEFTREDVESLLNEKSKRKDRFNYKERCENMIDYIKRLKVCIRWFQDLEMSYSLEHERLKNSLELTQQKCMEIELLLKIKEEELNSIITEMRRNCTNLQEKLIKEETERASAAESLEKEREARINIERSHTTLSEDLGRAQREIQSANQKISSLNEMYKRLQDYITSLQQYNGKLHTELSTVEDELKRVEKEKATVMENITMLKGELTLSIASQEEAVKQKDVLVSEVASLRGELQQVREERDRQLSQVQMLSSELEKVKESTENSSSELDKLTFKANELEAKCSLKDNQIKELNEQLATAEKKLQVSDISVIETRTEYEGQQKFIDELQRRLADAEYKLIEGEMLRKKLHNTILELKGNIRVFCRVRPLLPDESCSTEGKIFSYPTSMEASGRAIDLAQNGQKHSFTFDKVFAPESSQEEVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQTKQSQQPQGWKYEMQVSMLEIYNETIRDLLSTTRQESGTPGKQYTIKHDASGNTHVSDLTVVDVQSAREVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTEQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTFLLQPCLGGDSKTLMFVNISPEPSSLGESLCSLRFASRVNACEIGTPRRQTNGRSTESRLSYF 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182169g00004 805 Coils Coil 154 199 - -
Stsc182169g00004 805 Coils Coil 221 255 - -
Stsc182169g00004 805 CDD KISc_C_terminal 449 786 - -
Stsc182169g00004 805 FunFam Kinesin-like protein 397 786 - -
Stsc182169g00004 805 SMART kinesin_4 449 792 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc182169g00004 805 MobiDBLite consensus disorder prediction 1 29 - -
Stsc182169g00004 805 PANTHER KINESIN-LIKE PROTEIN KLP-3 308 792 IPR027640 GO:0003777|GO:0007018
Stsc182169g00004 805 ProSitePatterns Kinesin motor domain signature. 684 695 IPR019821 GO:0003777|GO:0005524|GO:0007018
Stsc182169g00004 805 PRINTS Kinesin heavy chain signature 685 703 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc182169g00004 805 PRINTS Kinesin heavy chain signature 734 755 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc182169g00004 805 PRINTS Kinesin heavy chain signature 654 671 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc182169g00004 805 PRINTS Kinesin heavy chain signature 527 548 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc182169g00004 805 Coils Coil 263 297 - -
Stsc182169g00004 805 Gene3D Kinesin motor domain 450 803 IPR036961 -
Stsc182169g00004 805 Coils Coil 368 402 - -
Stsc182169g00004 805 Coils Coil 417 437 - -
Stsc182169g00004 805 Coils Coil 312 346 - -
Stsc182169g00004 805 Pfam Kinesin motor domain 457 782 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc182169g00004 805 MobiDBLite consensus disorder prediction 1 28 - -
Stsc182169g00004 805 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 409 782 IPR027417 -
Stsc182169g00004 805 ProSiteProfiles Kinesin motor domain profile. 451 784 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc182169g00004 805 Gene3D - 317 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182169g00004 Stsc-Chr182169 8298 15530 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182169g00004 188 781 Calmodulin-binding Proteins AT5G65930 33.008 2.42e-81 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182169g00004 K10405 - gmx:100784221 1365.52