Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182163g00002 ATGTTGAAGGTGAAGGTGTATGCGGACCGCATGTCCCAGCCATCTCGTGCCGTTATTATCTTCTGCAAAGTTAACGGAATAGAATTCGACGAGATTAAAGTTGAGATCTCCAAAAGACAGCACTTATCTCCCGAATTTGCAGATATCAACCCTTTCAAGAAACTCCCTGCTATTGTTGATGGAAGGTTCAAGCTATTCGAGAGTCACGCAATTCTTATCTATCTTGCTTCTGCCTTTCCTGGTATTCCTGATCATTGGTACCCAGCTGATCTCTCTAGGAGAGCTAGAGTTCACTCTGTGTTGGATTGGCATCACCTGAACTTGCGCCATGGGGCAGCTCCATTTGTTCTACATACTGTGCTAGCTCCAGTATTTGGCCTACCACTTAACCCACAAGCAGCTGCAGCAGCAGAGAAAATTTTGATATCATCACTATCAAAATTAGAGAACATATGGCTTAAGGGGAGTGGACGGTACTTGCTTGGTGGCTTGCAACCGTCAATAGCGGACCTCAGCCTCGTCTGCGAAATTATGCAATTAGAGGTAAATGGGGGAGGGAGTAAGTCAGGCCACCATTCTGGAACGCCTCATGGTTTATTGTCTAATTTTTCAGTCAATACTTTTGCCCCGAGTTGA 636 0.4528 MLKVKVYADRMSQPSRAVIIFCKVNGIEFDEIKVEISKRQHLSPEFADINPFKKLPAIVDGRFKLFESHAILIYLASAFPGIPDHWYPADLSRRARVHSVLDWHHLNLRHGAAPFVLHTVLAPVFGLPLNPQAAAAAEKILISSLSKLENIWLKGSGRYLLGGLQPSIADLSLVCEIMQLEVNGGGSKSGHHSGTPHGLLSNFSVNTFAPS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182163g00002 211 SUPERFAMILY Thioredoxin-like 2 88 IPR036249 -
Stsc182163g00002 211 SFLD Main (cytGST) 5 188 - -
Stsc182163g00002 211 Gene3D Glutaredoxin 3 82 - -
Stsc182163g00002 211 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Stsc182163g00002 211 Pfam Glutathione S-transferase, N-terminal domain 3 76 IPR004045 -
Stsc182163g00002 211 SFLD Glutathione Transferase (cytosolic) 5 188 IPR040079 -
Stsc182163g00002 211 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 211 IPR010987 -
Stsc182163g00002 211 SUPERFAMILY GST C-terminal domain-like 84 183 IPR036282 -
Stsc182163g00002 211 CDD GST_N_Theta 4 79 IPR040075 -
Stsc182163g00002 211 Gene3D - 83 193 - -
Stsc182163g00002 211 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 3 182 IPR043377 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182163g00002 Stsc-Chr182163 12435 14931 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182163g00002 1 182 Glutathione S-transferase Gene Family AT5G41210 73.077 1.80e-101 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182163g00002 K00799 - tcc:18606508 308.531