Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182156g00004 ATGGCAGAACTATTCCTCCTGCTGCTGCTTCTGAGTTTGAATCTCATCAACATTGGAATTAGCCACGATGATCCTGTTCAATGTCCGGTCCGTCTGTACTGTAAACAAAACGAATCCAATATTCTTGAGCTCCCCGGCGTTCCATCCTCCGTAAAACTTCCCGTAGGTCGCATTAATTTCAAATTAACAACCTTAGAAGTGAATGCCAGCGGAATTTGCTTGACAGACCTCTTTCTTAGACTCAATTATTCATCATTCTTTCCTTTCCGATACATAGGAACAGATTTTGATTTGGCAGGTACTAGTTATGATGATGACCACTACTCACTTGAACCAAGAAACATTACTTTCTTTCGTTACCCTCCATCTCTATACATGGTAGATTGCCGGATTCAAGTGGCTGAGGATGACGATGGCATCATCGACTTGAACCTGGTATACTGCACTAAACTGTCTCGTAAGATTTTGCCAATACCAGCAAAGTTTATACGGGAAGAAGGTTCATTCTACTTGGTATGGTCCAAAACAAATTTGCGTAGTGAATGCTTAGTTGGTTGCAACAAATCCAACAAGGGGACTCAATACTATGAATCAATTCTTTTACCTATTACAGGTGCAATTATCCTTTTGTCAATCTTGGCTGCCCTGTACCATATATATTGCTATCATAGAAACAAAGGCGAAGATCAGCAAAGAGTTGAAACTTTTTTGAAGGACTACGAGGCATTAAACCCTACGAGATTCTCTCATGCTGATATCAAGAGAATCACAAGGCAATTCAAGGACAAGTTAGGTGAAGGAGCTCACGGAGCCGTTTACAAGGGTAAATTGTCCAATCAAATCCTTGTTGCTGTCAAGATTCTCAATACCACAGAAGGAGATGGGAAAGAATTCATAAATGAAGTGGGAACTATGGCTAAAATCCACCATGTCAATGTGGTTCGCTTGCTTGGCTACTGCGCAGACGGATCTCACCGTGCTTTAGTTTATCACTTCTTCCCCAAAGGTAATCTGCAAAGCTTCTTGGCTTTACCAAGCAACAAGGAAAGCTTCCTCGGATGGAACAAGATGCATCAGATTGCTCTGGGCACAGCCAAAGGGATTGAATATCTTCACCAAGGTTGTGATCAAAGAATTCTTCACTTTGACATTAATCCTCACAATGTCTTGTTAGACGAAAGCTTCACTCCAAAAATCTCTGACTTCGGTTTGGCTAAATTATGCCCAAAGAATCGAAGTACAGTGTCCATGACTGCAGCTCGGGGAACTTTAGGGTACATGGCGCCAGAAGTTTTTTCAAGAAATTTCGGCAATGTATCTTACAAATCTGATATCTACAGCTACGGAATGTTACTGCTTGAGATGGTTGGTGGAAGAAAAAATACAAATTCCAGTGAAGAAACTTTTCAAGTTCTATATCCAAATTGGATACATAGTTTGCTTGAAGGAGATGACACATATATTCCAATTGACGATGATGGAGATTTTAGAATTGCAAAGAAACTTGCAATAGTGGGACTCTGGTGCATCCAGTGGCACCCGGTGCACCGTCCCTCCATGAAAAGTGTAGTTCAAATGCTTGAAGGAGGAGAAGACAAACTGAAAGTGCCGCCGAATCCTTTTGAATCTGCAGCTGCCAATAGCTCAAGTGCAATTATTCCAGCAAGATGCTTGAATTTGGAATTGGAAGTGATTCCAGAAACAGATTAG 1710 0.4123 MAELFLLLLLLSLNLINIGISHDDPVQCPVRLYCKQNESNILELPGVPSSVKLPVGRINFKLTTLEVNASGICLTDLFLRLNYSSFFPFRYIGTDFDLAGTSYDDDHYSLEPRNITFFRYPPSLYMVDCRIQVAEDDDGIIDLNLVYCTKLSRKILPIPAKFIREEGSFYLVWSKTNLRSECLVGCNKSNKGTQYYESILLPITGAIILLSILAALYHIYCYHRNKGEDQQRVETFLKDYEALNPTRFSHADIKRITRQFKDKLGEGAHGAVYKGKLSNQILVAVKILNTTEGDGKEFINEVGTMAKIHHVNVVRLLGYCADGSHRALVYHFFPKGNLQSFLALPSNKESFLGWNKMHQIALGTAKGIEYLHQGCDQRILHFDINPHNVLLDESFTPKISDFGLAKLCPKNRSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNSSEETFQVLYPNWIHSLLEGDDTYIPIDDDGDFRIAKKLAIVGLWCIQWHPVHRPSMKSVVQMLEGGEDKLKVPPNPFESAAANSSSAIIPARCLNLELEVIPETD 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182156g00004 569 ProSitePatterns Protein kinases ATP-binding region signature. 264 286 IPR017441 GO:0005524
Stsc182156g00004 569 FunFam serine/threonine-protein kinase PBS1-like 225 332 - -
Stsc182156g00004 569 PANTHER RUST RESISTANCE KINASE LR10-RELATED 229 544 IPR045874 GO:0004672
Stsc182156g00004 569 Pfam Protein kinase domain 260 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc182156g00004 569 ProSiteProfiles Protein kinase domain profile. 258 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc182156g00004 569 FunFam PR5-like receptor kinase 333 539 - -
Stsc182156g00004 569 Gene3D Transferase(Phosphotransferase) domain 1 333 539 - -
Stsc182156g00004 569 Gene3D Phosphorylase Kinase; domain 1 231 332 - -
Stsc182156g00004 569 SUPERFAMILY Protein kinase-like (PK-like) 239 528 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182156g00004 Stsc-Chr182156 7847 9764 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182156g00004 220 540 Receptor kinase-like Gene Family AT1G66980 47.416 1.17e-97 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Stsc182156g00004 Pkinase 8.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182156g00004 - - adu:107495716 808.905