Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182147g00004 ATGGAGAAGAAGGTGACTCATGATGACACAGTAGTGAAGGTGATAGAGCAGTGCCAAGTAGGTGCTCCACCAGCTAATCTCCACAACCTCGTATCTGACACACCAAAAGATGCCACGTGCTTCCACCCTTTTGTTCCTATATTGCCTTCTCCACGTGTCTTAGAGGATGGCACCTTGTTGATTCCTCCCATGGCTATTCAACTCACTATCTTCCCCAACTCTGGCTTCGCCATATGCTTCAATTTCAGTCACGTGGTGGTGGATGGGAAGGCTTTTCATCACTTCATGAAGTTTTGGGCGTCAGTTTGTGGGTCTAAAGAGAACATTGTTGATTTGCCATGCCATGATAGAGACATGATTGAAGACCCAAACGGGCTTAAGCCTATGTTCTTAGAAACAGTGTGGGATTCTCCAAGAGAAAGGTTCATGAGCCTTGGCCATAATCTTCCTACTGACAATGTTCGCCGCACCTTTGTGTTGAGGCGTGAACATGTTGATAATTTGAAGAAATATGTGTCTGCCAAGTGCCAAAACCATGGTCTAGGAACATTACATCTGTCAACCTTTGTTGTGACATGTTCTTTGATTTGGGTTTGTAAGGTAAAATCTGAAGAAATCAGAATTGATGAAGATGAAGATGAAGAATTATACATATATCTTTGGTTAGATTGTCGTAACATTGCTGAATGGAGAATTCCCACAACATACTTTGGAAATTGTTTGGTTAATGGCATTGGTGCAATGAAGAGGAGCAAGCTAGCGGGGCAAAATGGTATTTTTGAAGCTGCTGTTGCTATTGGGAACAAAGTTAGAGAAATGCAATCTGAACCTTATAAATTTGCTGAATCATTAATGTCATGTTTTAGTAAATGGTCGCATCGTATGTTGGGAGTTGCAGGGTCACCAAAGCTGGATGTGTATGAGACTGATTTTGGGTGGGGAAAACCCAAATCGAGTGAAGTAGTTCACATGAATTCTCAATTGGTCTCGCTCTCTGATTGTAGGGAAAAAGAAGATGGAATTGAAGTTGGTGTAGCACTTGGGAGGAATCAGATGCTTAAATTCAACACCATTTTAGAAGAGCTTCTTGCAAAAAATTCTAGTCTATGA 1110 0.4153 MEKKVTHDDTVVKVIEQCQVGAPPANLHNLVSDTPKDATCFHPFVPILPSPRVLEDGTLLIPPMAIQLTIFPNSGFAICFNFSHVVVDGKAFHHFMKFWASVCGSKENIVDLPCHDRDMIEDPNGLKPMFLETVWDSPRERFMSLGHNLPTDNVRRTFVLRREHVDNLKKYVSAKCQNHGLGTLHLSTFVVTCSLIWVCKVKSEEIRIDEDEDEELYIYLWLDCRNIAEWRIPTTYFGNCLVNGIGAMKRSKLAGQNGIFEAAVAIGNKVREMQSEPYKFAESLMSCFSKWSHRMLGVAGSPKLDVYETDFGWGKPKSSEVVHMNSQLVSLSDCREKEDGIEVGVALGRNQMLKFNTILEELLAKNSSL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182147g00004 369 Pfam Transferase family 48 360 - -
Stsc182147g00004 369 Gene3D - 149 365 IPR023213 -
Stsc182147g00004 369 PANTHER - 25 363 - -
Stsc182147g00004 369 Gene3D - 3 144 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182147g00004 Stsc-Chr182147 17701 19482 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182147g00004 30 362 Monolignol Biosynthesis Gene Families AT5G48930 21.937 7.41e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182147g00004 - - ahf:112744620 419.468